Transcript Information: R_Transcript_242386.p2


Annotated TAIR IDAT4G36020.1
Annotated Gene Namecold shock domain protein 1
Annotated Gene Symbol(s)CSDP1
Annotation TypeHomolog
Chromosome Positionchr4:17043443-17044342 | Reverse length=299
E-Value5E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.26646658328057
Replicate 20.3065153345445
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_242386.p2 GENE.R_Transcript_242386~~R_Transcript_242386.p2 ORF type:internal len:137 (+),score=-19.91,zf-CCHC|PF00098.19|2.6e-08,zf-CCHC|PF00098.19|3e-09,zf-CCHC|PF00098.19|2.4e-09,zf-CCHC|PF00098.19|1.4e-08,zf-CCHC_3|PF13917.2|0.005,zf-CCHC_3|PF13917.2|0.008,zf-CCHC_3|PF13917.2|0.0063,zf-CCHC_3|PF13917.2|0.061,zf-CCHC_2|PF13696.2|0.0011,zf-CCHC_2|PF13696.2|0.17,zf-CCHC_2|PF13696.2|0.17,zf-CCHC_2|PF13696.2|0.24,zf-CCHC_4|PF14392.2|0.1,zf-CCHC_4|PF14392.2|0.12,zf-CCHC_4|PF14392.2|0.14,zf-CCHC_4|PF14392.2|0.14 R_Transcript_242386:3-410(+)
TGTACTTTATTGATCAAGTTCTCCGCTATGGCGTGCCGCAACTGCAACCAGATGGGCCACTTCGCCCGCGAGTGCCCCCAGGCCAGCACCGGTGGCCGCGGCGGTGGTGCCGGCGGCAACGTGTGCTACAACTGCAACCAGCCCGGCCACATGTCCCGCGAGTGCCCGCAGCCCCGCCAGGGTGGCCGCAGCGCCGGCGGCGCCGGTGGCAGCGTGTGCTACAACTGCAACCAGCCTGGTCACATGTCGCGCGAGTGCCCGCAGCCCCGTCAGGAGCGCGCGCCCCGCGCCGGCGGTGCCGGTGGCAGCGTGTGCTACAACTGCAACCAGTCCGGCCACATGTCCCGCGAGTGCCCGATGCCGCGTCAGGAGCGTGCTCCCCGCGCCGGCGGTGCTGGCGGCAGCGTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_242386.p2 GENE.R_Transcript_242386~~R_Transcript_242386.p2 ORF type:internal len:137 (+),score=-19.91,zf-CCHC|PF00098.19|2.6e-08,zf-CCHC|PF00098.19|3e-09,zf-CCHC|PF00098.19|2.4e-09,zf-CCHC|PF00098.19|1.4e-08,zf-CCHC_3|PF13917.2|0.005,zf-CCHC_3|PF13917.2|0.008,zf-CCHC_3|PF13917.2|0.0063,zf-CCHC_3|PF13917.2|0.061,zf-CCHC_2|PF13696.2|0.0011,zf-CCHC_2|PF13696.2|0.17,zf-CCHC_2|PF13696.2|0.17,zf-CCHC_2|PF13696.2|0.24,zf-CCHC_4|PF14392.2|0.1,zf-CCHC_4|PF14392.2|0.12,zf-CCHC_4|PF14392.2|0.14,zf-CCHC_4|PF14392.2|0.14 R_Transcript_242386:3-410(+)
CTLLIKFSAMACRNCNQMGHFARECPQASTGGRGGGAGGNVCYNCNQPGHMSRECPQPRQGGRSAGGAGGSVCYNCNQPGHMSRECPQPRQERAPRAGGAGGSVCYNCNQSGHMSRECPMPRQERAPRAGGAGGSV

Click here to download the sequence:
Link to NCBI Protein BLAST