Transcript Information: R_Transcript_242387.p2


Annotated TAIR IDAT4G36020.1
Annotated Gene Namecold shock domain protein 1
Annotated Gene Symbol(s)CSDP1
Annotation TypeHomolog
Chromosome Positionchr4:17043443-17044342 | Reverse length=299
E-Value1E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4857061242213
Replicate 20.24414302809649
Replicate 30.26635741390875
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_242387.p2 GENE.R_Transcript_242387~~R_Transcript_242387.p2 ORF type:5prime_partial len:86 (+),score=-23.05,zf-CCHC|PF00098.19|6.8e-09,zf-CCHC|PF00098.19|1.2e-09,zf-CCHC|PF00098.19|3e-09,zf-CCHC_3|PF13917.2|0.027,zf-CCHC_3|PF13917.2|0.0033,zf-CCHC_3|PF13917.2|0.058,zf-CCHC_4|PF14392.2|0.068,zf-CCHC_4|PF14392.2|0.069,zf-CCHC_4|PF14392.2|0.87 R_Transcript_242387:1-258(+)
GGCGGTGCTGGCGGCAGCGTGTGCTACAACTGCAACCAGTCCGGCCACATGTCCCGCGAGTGCCCGATGCCGCGTCAGGAGCGTGCTCCCCGCGCCGGCGGTGCTGGCGGCAGCGTGTGCTACAACTGCAACCAGCCCGGCCACATGTCCCGCGAGTGCCCGCAGCCGCGCCAGGAGCGCGCGCCCCGCGCCGCTAGCGGCGTGTGCTACAAGTGCAACCAGCCCGGCCACATCTCGCGCGACTGCCCCAACCAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_242387.p2 GENE.R_Transcript_242387~~R_Transcript_242387.p2 ORF type:5prime_partial len:86 (+),score=-23.05,zf-CCHC|PF00098.19|6.8e-09,zf-CCHC|PF00098.19|1.2e-09,zf-CCHC|PF00098.19|3e-09,zf-CCHC_3|PF13917.2|0.027,zf-CCHC_3|PF13917.2|0.0033,zf-CCHC_3|PF13917.2|0.058,zf-CCHC_4|PF14392.2|0.068,zf-CCHC_4|PF14392.2|0.069,zf-CCHC_4|PF14392.2|0.87 R_Transcript_242387:1-258(+)
GGAGGSVCYNCNQSGHMSRECPMPRQERAPRAGGAGGSVCYNCNQPGHMSRECPQPRQERAPRAASGVCYKCNQPGHISRDCPNQ*

Click here to download the sequence:
Link to NCBI Protein BLAST