Transcript Information: R_Transcript_242669.p1


Annotated TAIR IDAT1G08560.1
Annotated Gene Namesyntaxin of plants 111
Annotated Gene Symbol(s)SYP111, KN, ATSYP111
Annotation TypeOrtholog
Chromosome Positionchr1:2709778-2710710 | Reverse length=310
E-Value1E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.009137006612
Replicate 28.5664905698496
Replicate 34.3980936184613
Condition 2: 8 Hour
Replicate 13.1341907132474
Replicate 24.4721763682371
Replicate 33.1946834691881
Condition 3: 24 Hour
Replicate 18.8157979754384
Replicate 211.821618765349
Replicate 39.6305900622348


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_242669.p1 GENE.R_Transcript_242669~~R_Transcript_242669.p1 ORF type:5prime_partial len:125 (-),score=14.81,SNARE|PF05739.15|1.1e-20,SNARE|PF05739.15|1.2e+03,Syntaxin|PF00804.21|1e-13,Syntaxin|PF00804.21|7.2e+02 R_Transcript_242669:94-468(-)
GTGGAGATTCAAGGTCGACATGATGCAGCTAAGGAGATTGAGCGCAGCCTTTTGGAGCTCCACCAAGTGTTCCTAGACATGGCTGTTATGGTTGAGGCTCAAGGGGAGCAAATGGACAACATTGAGCATCATGTTATTAATGCCTCACATTATGTTAAGGATGGTACTAAGAATCTCAAGCAAGCTAAGAATTATCAGAGGAGCAGCAGAAAGTGGATGTGTATTGGGATTATAGCTCTCTTGGTTATTATACTTCTCATTGTAATTCCCACCATTACCAGCTTTACTCATTGTTTTCTTGTGCTTTGTTATGACGAATTTTTATTTCAAACAAATGTAATAGTACTAATAATACTATTATTATCGCTAGTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_242669.p1 GENE.R_Transcript_242669~~R_Transcript_242669.p1 ORF type:5prime_partial len:125 (-),score=14.81,SNARE|PF05739.15|1.1e-20,SNARE|PF05739.15|1.2e+03,Syntaxin|PF00804.21|1e-13,Syntaxin|PF00804.21|7.2e+02 R_Transcript_242669:94-468(-)
VEIQGRHDAAKEIERSLLELHQVFLDMAVMVEAQGEQMDNIEHHVINASHYVKDGTKNLKQAKNYQRSSRKWMCIGIIALLVIILLIVIPTITSFTHCFLVLCYDEFLFQTNVIVLIILLLSLV*

Click here to download the sequence:
Link to NCBI Protein BLAST