Transcript Information: R_Transcript_242745.p1


Annotated TAIR IDAT5G38430.1
Annotated Gene NameRibulose bisphosphate carboxylase (small chain) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:15384350-15385155 | Reverse length=181
E-Value2.8E-105
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.61183109345426
Replicate 20.58648883844408
Replicate 31.0237648087666
Condition 2: 8 Hour
Replicate 10.54717016641889
Replicate 21.9987380416702
Replicate 30
Condition 3: 24 Hour
Replicate 10.12825590630002
Replicate 20.7392824209132
Replicate 30.36683303944521


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_242745.p1 GENE.R_Transcript_242745~~R_Transcript_242745.p1 ORF type:complete len:179 (+),score=33.91,RuBisCO_small|PF00101.16|1.4e-39,RbcS|PF12338.4|6.9e-22 R_Transcript_242745:38-574(+)
ATGGCTTCCTCAATGATCTCTTCCCCAGCTGTTACCACTGTCAACCGTGCCGGTGCCGGCATGGTTGCTCCATTCACTGGCCTCAAGTCCATGGCTGGCTTCCCCACCAGAAAGACCAACAATGACATTACCTCCATTGCTAGCAACGGTGGAAGAGTGCAATGCATGCAGGTGTGGCCACCAGTTGGCAAGAAGAAGTTTGAGACTCTTTCCTACCTGCCAGACCTTGATGATGCACAATTGGCAAAGGAAGTAGAATACCTTCTTAGGAAGGGATGGATTCCTTGCTTGGAATTCGAGTTGGAGCACGGTTTCGTGTACCGTGAGCACAACAGGTCACCTGGATACTATGATGGACGCTACTGGACCATGTGGAAGCTGCCTATGTTTGGCTGCACTGATGCTTCTCAGGTGTTGAAGGAGCTTCAAGAGGCTAAGACTGCATACCCCAACGGCTTCATCCGTATCATCGGATTCGACAACGTTCGCCAAGTGCAGTGCATCAGCTTCATCGCCTACAAGCCCCCAGGCTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_242745.p1 GENE.R_Transcript_242745~~R_Transcript_242745.p1 ORF type:complete len:179 (+),score=33.91,RuBisCO_small|PF00101.16|1.4e-39,RbcS|PF12338.4|6.9e-22 R_Transcript_242745:38-574(+)
MASSMISSPAVTTVNRAGAGMVAPFTGLKSMAGFPTRKTNNDITSIASNGGRVQCMQVWPPVGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYREHNRSPGYYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPPGF*

Click here to download the sequence:
Link to NCBI Protein BLAST