Transcript Information: R_Transcript_24314.p1


Annotated TAIR IDAT3G06720.1
Annotated Gene Nameimportin alpha isoform 1
Annotated Gene Symbol(s)AT-IMP, ATKAP ALPHA, AIMP ALPHA, IMPA-1, IMPA1
Annotation TypeOrtholog
Chromosome Positionchr3:2120559-2123555 | Forward length=532
E-Value8.8E-305
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 128.397028105512
Replicate 219.569722513449
Replicate 324.702561972157
Condition 2: 8 Hour
Replicate 119.878768406649
Replicate 222.633575522176
Replicate 330.705947582571
Condition 3: 24 Hour
Replicate 131.756966792329
Replicate 226.051333672145
Replicate 333.365403486124


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_24314.p1 GENE.R_Transcript_24314~~R_Transcript_24314.p1 ORF type:5prime_partial len:574 (+),score=143.42,Arm|PF00514.19|2.5e-10,Arm|PF00514.19|6.2e-14,Arm|PF00514.19|5.1e-06,Arm|PF00514.19|1.2e-07,Arm|PF00514.19|2.6e-07,Arm|PF00514.19|2.1e-08,Arm|PF00514.19|1.6e-11,Arm|PF00514.19|1.6e-06,HEAT_EZ|PF13513.2|1.9e+03,HEAT_EZ|PF13513.2|1.8e-09,HEAT_EZ|PF13513.2|7.6e-05,HEAT_EZ|PF13513.2|4.4e+02,HEAT_EZ|PF13513.2|0.29,HEAT_EZ|PF13513.2|3.1e+02,HEAT_2|PF13646.2|1.2,HEAT_2|PF13646.2|1.9e-07,HEAT_2|PF13646.2|0.039,HEAT_2|PF13646.2|0.006,HEAT_2|PF13646.2|0.14,HEAT_2|PF13646.2|1.9e+02,Arm_3|PF16186.1|1.3e-19,IBB|PF01749.16|7.5e-19,HEAT|PF02985.18|68,HEAT|PF02985.18|0.00019,HEAT|PF02985.18|5.6e+03,HEAT|PF02985.18|30,HEAT|PF02985.18|11,HEAT|PF02985.18|1.4e+03,HEAT|PF02985.18|3e+03,HEAT|PF02985.18|1.1e+04,Arm_2|PF04826.9|9.8,Arm_2|PF04826.9|1.6e+03,Arm_2|PF04826.9|0.1,Arm_2|PF04826.9|19 R_Transcript_24314:3-1724(+)
TGGCCAGACACCATTAAAGGAAGAATAAAGAAATCAGAATTCTCTCTCTCCTCTCTCAACTCAGAAAATCTCACTAAAATCGAGCCAAGCATTTCCTTCCCCACAACCCTCGTATTTTCTCTCTCCTCTGCTCCTTCGAATCGAAATTCAATGTCTCTCCGACCAAGCGCTCGAACGGAGGTTCGCAAGAACCAGTACAAGGTATCAGTAGACGCCGATGAAGGCCGTCGTAGAAGAGAAGACAACTTAGTTGAGATTCGCAAGTCTCGCCGTGAAGAATCTCTTCAAAAACACCGTAAAGATGCTTTTCAACAACAGCAACAGTTCCCTAGCCCTGCTGTCGACCAGAAATTGGAGCAGCTATCTGCAATGGTTGCAGGACTTTATGCTGATGATAGGAATCTTCAGCTGGAGGCTACTACACAATTCCGTAAATTGCTTTCTATAGAGCGCTGTCCCCCAATCAATGAAGTCATTCAGGCTGGTGTGGTTCCGCGTTTTGTCGAGTTCTTAACACAAGAGGACTTTCCCCAACTTCAGTTTGAGGCTGCTTGGGCTCTGACAAATATTGCCTCTGGGACATCAGAAAACACTAAGGCGGTGATTGATCATGGTGCGGTTCCAGTCTTTGTGAAATTACTTGGCTCCGCGAGTGATGATGTCCGTGAGCAGGCTGTTTGGGCTTTAGGAAACATAGCGGGTGATTCTCCAAAGTGTCGCGATTTTGTGCTTGAGCATGCAGCTTTGGTTCCGTTGATGGCACAATTGAATGAGAATGCGAAACTTTCAATGCTGAGAAATGCTACCTGGACACTTTCAAACTTCTGCAGGGGCAAGCCTCAGCCTTTATTTGAGCAGGTGAAACCTGCCCTTCCAGTTCTTCGGAGTCTCATCCATTCCAATGATGAAGAAGTGTTAACTGATGCATGCTGGGCTCTCTCATATCTATCAGATGGTACCAATGATAAAATTCAAGCTGTTATAGAGGCTGGTGTATGTCATCGGCTTGTTGAGCTTTTACGCCACCCATCTCCTGCTGTGCTCATCCCTGCACTTCGAACTGTTGGAAACATTGTGACTGGAGATGATATCCAAACTCAGTGCATCATCAATCTCCAAGCTCTTCCCTGCCTTCTTAACCTTCTTACTGGGAACTATAAGAAGAGCATTAAAAAGGAGACTTGCTGGACTCTGTCAAACATCACAGCAGGCAACAAGGAGCAAATTCAGGCGGTAATTGAGGCTGGTATAATTGGTCCCCTTGTACACGTCCTTCAAAATGCAGAGTTTGATATTAAAAAGGAAGCTGCTTGGGCAATTTCTAATGCTACATCTGGTGGCACTGCTGAGCAAATCAAGTTCCTTGTGAATCAGGGATGCATCAAGCCACTTTGTGATCTGCTTGTTTGCCCTGATCCAAGAATTATCACAGTCTGCTTGGAAGGACTTGAAAACATTCTCAAAATTGGGGAAGCTGAAAAGAATGTGGGTACTTCTGGAGGTGTGAATCTCTATGCTCAATTGGTAGATGATGCGGAGGGTTTGGAGAAAATTGAAAACCTGCAGAGTCATGATAACAGTGACATTTATGAAAAAGCTGTGAAGATTCTTGAAACTTATTGGTTGGAGGAAGAAGATGAGGTAGTGCCCTCCGCTGATGGCCAGCAGCCTGGTTTCCAGTTTGGTGGCAATGTTCCATCTGGAGGATTCAACTTCAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_24314.p1 GENE.R_Transcript_24314~~R_Transcript_24314.p1 ORF type:5prime_partial len:574 (+),score=143.42,Arm|PF00514.19|2.5e-10,Arm|PF00514.19|6.2e-14,Arm|PF00514.19|5.1e-06,Arm|PF00514.19|1.2e-07,Arm|PF00514.19|2.6e-07,Arm|PF00514.19|2.1e-08,Arm|PF00514.19|1.6e-11,Arm|PF00514.19|1.6e-06,HEAT_EZ|PF13513.2|1.9e+03,HEAT_EZ|PF13513.2|1.8e-09,HEAT_EZ|PF13513.2|7.6e-05,HEAT_EZ|PF13513.2|4.4e+02,HEAT_EZ|PF13513.2|0.29,HEAT_EZ|PF13513.2|3.1e+02,HEAT_2|PF13646.2|1.2,HEAT_2|PF13646.2|1.9e-07,HEAT_2|PF13646.2|0.039,HEAT_2|PF13646.2|0.006,HEAT_2|PF13646.2|0.14,HEAT_2|PF13646.2|1.9e+02,Arm_3|PF16186.1|1.3e-19,IBB|PF01749.16|7.5e-19,HEAT|PF02985.18|68,HEAT|PF02985.18|0.00019,HEAT|PF02985.18|5.6e+03,HEAT|PF02985.18|30,HEAT|PF02985.18|11,HEAT|PF02985.18|1.4e+03,HEAT|PF02985.18|3e+03,HEAT|PF02985.18|1.1e+04,Arm_2|PF04826.9|9.8,Arm_2|PF04826.9|1.6e+03,Arm_2|PF04826.9|0.1,Arm_2|PF04826.9|19 R_Transcript_24314:3-1724(+)
WPDTIKGRIKKSEFSLSSLNSENLTKIEPSISFPTTLVFSLSSAPSNRNSMSLRPSARTEVRKNQYKVSVDADEGRRRREDNLVEIRKSRREESLQKHRKDAFQQQQQFPSPAVDQKLEQLSAMVAGLYADDRNLQLEATTQFRKLLSIERCPPINEVIQAGVVPRFVEFLTQEDFPQLQFEAAWALTNIASGTSENTKAVIDHGAVPVFVKLLGSASDDVREQAVWALGNIAGDSPKCRDFVLEHAALVPLMAQLNENAKLSMLRNATWTLSNFCRGKPQPLFEQVKPALPVLRSLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCHRLVELLRHPSPAVLIPALRTVGNIVTGDDIQTQCIINLQALPCLLNLLTGNYKKSIKKETCWTLSNITAGNKEQIQAVIEAGIIGPLVHVLQNAEFDIKKEAAWAISNATSGGTAEQIKFLVNQGCIKPLCDLLVCPDPRIITVCLEGLENILKIGEAEKNVGTSGGVNLYAQLVDDAEGLEKIENLQSHDNSDIYEKAVKILETYWLEEEDEVVPSADGQQPGFQFGGNVPSGGFNFS*

Click here to download the sequence:
Link to NCBI Protein BLAST