Transcript Information: R_Transcript_243413.p1


Annotated TAIR IDAT5G61380.1
Annotated Gene NameCCT motif -containing response regulator protein
Annotated Gene Symbol(s)TOC1, APRR1, PRR1, AtTOC1
Annotation TypeOrtholog
Chromosome Positionchr5:24675540-24678176 | Forward length=618
E-Value2.3E-71
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1099773553545
Replicate 20.56746757881887
Replicate 32.0120783023647
Condition 2: 8 Hour
Replicate 14.7979059693926
Replicate 25.136959341894
Replicate 37.4814070800244
Condition 3: 24 Hour
Replicate 12.9472860630161
Replicate 22.8314183710876
Replicate 32.9577979306618


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_243413.p1 GENE.R_Transcript_243413~~R_Transcript_243413.p1 ORF type:5prime_partial len:148 (-),score=25.06,Response_reg|PF00072.20|4.1e-14 R_Transcript_243413:135-578(-)
GACATTGATATCATACTTTCTGAAGTGGATCTTCCCACGAAGAAAGGGCTGAAATTGTTGAAATACATAATGCGGGATAAAGAGTTACAACGGATCCCTGTGATAATGATGTCAACGCAAGATGAAGTCTCTCTTGTTGTGAAGTGCTTGAGGTTAGGAGCAGCAGACTACCTCGTGAAGCCCTTGCGCACAAATGAGCTGTTAAACTTGTGGACTCACATGTGGAGGAGGAGGCAAATGCTTGGACTTGCGGAGAAGAACATTGTGAATTATGACTTTGATATAGCAGTGTCTGATCCCAGTGATGCTAATACCAATAGTACCACACTGTTTTCAGATGACACTGATGACAGGTCCCGGAGAAGTGTTAACCCAGAGATTAGCTTAACAATACAACTGGAAGATGAGGTCACTTTCCAGTGTTTCCAAAGAAGAGCGAGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_243413.p1 GENE.R_Transcript_243413~~R_Transcript_243413.p1 ORF type:5prime_partial len:148 (-),score=25.06,Response_reg|PF00072.20|4.1e-14 R_Transcript_243413:135-578(-)
DIDIILSEVDLPTKKGLKLLKYIMRDKELQRIPVIMMSTQDEVSLVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRQMLGLAEKNIVNYDFDIAVSDPSDANTNSTTLFSDDTDDRSRRSVNPEISLTIQLEDEVTFQCFQRRAS*

Click here to download the sequence:
Link to NCBI Protein BLAST