Transcript Information: R_Transcript_243440.p1


Annotated TAIR IDAT5G65570.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:26203968-26206184 | Forward length=738
E-Value1E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.082220544841075
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.16352802360709
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.19718652871079


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_243440.p1 GENE.R_Transcript_243440~~R_Transcript_243440.p1 ORF type:3prime_partial len:222 (-),score=25.12,PPR|PF01535.16|3,PPR|PF01535.16|1.1e+02,PPR|PF01535.16|0.0012,PPR|PF01535.16|0.00041,PPR_2|PF13041.2|12,PPR_2|PF13041.2|4.5,PPR_2|PF13041.2|2.1e+02,PPR_2|PF13041.2|0.3,PPR_2|PF13041.2|0.0012,PPR_1|PF12854.3|23,PPR_1|PF12854.3|0.62,PPR_1|PF12854.3|0.31,PPR_1|PF12854.3|0.092,PPR_3|PF13812.2|2.5,PPR_3|PF13812.2|3.8e+03,PPR_3|PF13812.2|2.8e+03,PPR_3|PF13812.2|0.3,PPR_3|PF13812.2|1.3 R_Transcript_243440:3-665(-)
ATGGTCGACTTTGACACTCAACAAACACCAAATTTCAAAGACCCGCGTTCAATACACGCCCACATAATCAAAACATCAAAGACAGATCATTCCCTTCCGTTGCTGAACAAGCTCATCACTTTCTACTCAAAATCCAACCTCTTTTCCGATGCCATTGCCGTTTTCCGTCAAATTACCTTTCCCAATGTTGTCTCTTGGACTGCCCTTATCTCCGGCAACCCCAATTCCCCACTATCTCTCCACCATTTCATCTCCATGCTTCGCTACCCAACCAGGCCTAATGAACGAACTTTAGCATCAGTTCTCAAGACATGTGCTTCTCTTTATGCTCTATCCTTTGGCCAACAAATACATTCCCTTTCCCTAAAGCTTTGCCTCGCATCCGAGCCATTTTGCGCGTCTGCCTTCGTTCATTTGTATGCTAAATGCAGGCTCCCTGATGATGCCCGCAAGGTGTTCGACGAAATGCCTGAAAGAGATGAAGTTTGTTATTCGTCTGTTATTGTTGGGTTTGCTCAGAATTCTCGTCCTATTGATGCATTGACCTTTTTTGCTCAGATGGTGTCGAGGAATGTGGGGTCCACTGTGTATAGTGTTTCGGGTGCGTTGAGTGCTGGTGCTGAGCTTGCTGCTTTGGAGCACTGCAGGGTGATTCATGGTCAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_243440.p1 GENE.R_Transcript_243440~~R_Transcript_243440.p1 ORF type:3prime_partial len:222 (-),score=25.12,PPR|PF01535.16|3,PPR|PF01535.16|1.1e+02,PPR|PF01535.16|0.0012,PPR|PF01535.16|0.00041,PPR_2|PF13041.2|12,PPR_2|PF13041.2|4.5,PPR_2|PF13041.2|2.1e+02,PPR_2|PF13041.2|0.3,PPR_2|PF13041.2|0.0012,PPR_1|PF12854.3|23,PPR_1|PF12854.3|0.62,PPR_1|PF12854.3|0.31,PPR_1|PF12854.3|0.092,PPR_3|PF13812.2|2.5,PPR_3|PF13812.2|3.8e+03,PPR_3|PF13812.2|2.8e+03,PPR_3|PF13812.2|0.3,PPR_3|PF13812.2|1.3 R_Transcript_243440:3-665(-)
MVDFDTQQTPNFKDPRSIHAHIIKTSKTDHSLPLLNKLITFYSKSNLFSDAIAVFRQITFPNVVSWTALISGNPNSPLSLHHFISMLRYPTRPNERTLASVLKTCASLYALSFGQQIHSLSLKLCLASEPFCASAFVHLYAKCRLPDDARKVFDEMPERDEVCYSSVIVGFAQNSRPIDALTFFAQMVSRNVGSTVYSVSGALSAGAELAALEHCRVIHGH

Click here to download the sequence:
Link to NCBI Protein BLAST