Transcript Information: R_Transcript_243443.p1


Annotated TAIR IDAT4G33170.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:15995701-15998673 | Reverse length=990
E-Value5E-92
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.91057855102905
Replicate 20.52371724394394
Replicate 30.67525530328794
Condition 2: 8 Hour
Replicate 10.55523503281735
Replicate 20.35493463239977
Replicate 31.440604017491
Condition 3: 24 Hour
Replicate 11.4576385541399
Replicate 21.0002384984389
Replicate 31.389695535676


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_243443.p1 GENE.R_Transcript_243443~~R_Transcript_243443.p1 ORF type:5prime_partial len:441 (+),score=95.33,DYW_deaminase|PF14432.2|1.3e-34,PPR|PF01535.16|0.0013,PPR|PF01535.16|0.0011,PPR|PF01535.16|0.025,PPR|PF01535.16|0.013,PPR|PF01535.16|22,PPR|PF01535.16|0.049,PPR|PF01535.16|87,PPR|PF01535.16|1.7e+02,PPR|PF01535.16|1.8e+03,PPR_2|PF13041.2|0.51,PPR_2|PF13041.2|0.0034,PPR_2|PF13041.2|19,PPR_2|PF13041.2|3.6e-08,PPR_2|PF13041.2|0.81,PPR_2|PF13041.2|0.51,PPR_2|PF13041.2|3.8e+03,PPR_2|PF13041.2|1.5e+03,PPR_2|PF13041.2|1.1e+02,PPR_3|PF13812.2|1.7,PPR_3|PF13812.2|3.4,PPR_3|PF13812.2|7.9,PPR_3|PF13812.2|0.33,PPR_3|PF13812.2|32,PPR_3|PF13812.2|1,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|9.3e+03,PPR_1|PF12854.3|0.33,PPR_1|PF12854.3|0.23,PPR_1|PF12854.3|4e+02,PPR_1|PF12854.3|0.87,PPR_1|PF12854.3|1.1e+02,PPR_1|PF12854.3|4.6e+02,PPR_1|PF12854.3|0.03,PPR_1|PF12854.3|1.2e+03,PPR_1|PF12854.3|1.6e+04 R_Transcript_243443:1-1323(+)
TGCGCGTCTGCCCTCGTTCATTTGTATGCTCAATGCAGGCTCCCTGATGATGCTCGCAAGGTGTTCGACGAAATGCCTGAAAGGGATGAAGTTTGTTATTCGTCTGTTATTGTTGGGTTTGCTCAGAATTCTCGTCCTATTGATGCATTGACCTTTTTTGCTCAGATGGTGTCGAGAAATGTGGGGTCCACTGTGTATAGTGTTTCGGGTGCGTTGAGTGCTGGTGCTGAGCTTGCTGCTTTGGAGCACTGTAGGGTGATTCATGGTCATGGACTTGTTACTGGGTTGTGTAGAGCTGTTTATGTGAGTACTGGATTGGTCACTGCATATGGGAAATGTGGAATGGTCTTGGAAGCTAGGAGGGTGTTTGACGAGTCTTTGCAGGATATGAATATAGTGGGTTGGAACGCATTGATGGCCTCCTATGCTCAACAAGGGGATAAAAGCTCAGTTCTTGAGTTGTTCAATTTAGCTGAATCACGAGGGCTCGAACCTGATGAATTCAGCTTCTTGGCTGTGTTAACTGCACTGTATAACATGGGCTTGGCTGATGAGACTGAACAGTGGATTAACAGGATGAAAGTAGATTATAGTATAGAGCCATCATTAGAGCACTATACATGCTTAGTAGGTGCATTGGGTAGAGTTGGGAAGTTAGAAGAGGCAGAAAGGATTGCTAATACAATGCCAGTCAAGCCAGATGCAGGCGTGTGGCGGGTATTACTGTCAGCAAGTGCAACTCATAGAGCTGCTGACATTGCTTGGAGGATGAGTAAGCGGCTTTTGGAACTCGAACCACATGATGACACTGCCTATGTTATTGCTGCGAATACGTTCTCAGCCGCAGGGAGATGGAATGAAGCTGCAGAGATCAGGAAGATGATGAATAATGTGAGAGTGAAGAAGGAAGGCGGAAGGAGTTGGCTTGAGCTACGAGGGGAAGTGCACGTGTTCTTGTCAGGGGATAATGAGCACGAAAGGATAGATGAAACTTATGCAAAGCTTTCAGAACTGATGGTGGAGATTGGTAAATTGGGTTATGTACCAAATTGGAATGAGATGTTGCATGATGTAGAGGAAGGGGAGAAAAGAGAAGGACTTTCATATCACAGTGAGAAGTTAGCATTGGCATTTGGGGTTTTAACTGGTGCAGCACCACCTGGGAAGCCTTTAAGGATTCTAAAGAATCTTAGAATTTGTAGGGACTGTCATGAGGCCTTTAAATATTTCAGCAGGATTTTAGAAAGAGAAATTATTGTCAGAGATGTGAACAGATACCACAGGTTTCTGGACGGATGCTGTACTTGTGGAGATTATTGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_243443.p1 GENE.R_Transcript_243443~~R_Transcript_243443.p1 ORF type:5prime_partial len:441 (+),score=95.33,DYW_deaminase|PF14432.2|1.3e-34,PPR|PF01535.16|0.0013,PPR|PF01535.16|0.0011,PPR|PF01535.16|0.025,PPR|PF01535.16|0.013,PPR|PF01535.16|22,PPR|PF01535.16|0.049,PPR|PF01535.16|87,PPR|PF01535.16|1.7e+02,PPR|PF01535.16|1.8e+03,PPR_2|PF13041.2|0.51,PPR_2|PF13041.2|0.0034,PPR_2|PF13041.2|19,PPR_2|PF13041.2|3.6e-08,PPR_2|PF13041.2|0.81,PPR_2|PF13041.2|0.51,PPR_2|PF13041.2|3.8e+03,PPR_2|PF13041.2|1.5e+03,PPR_2|PF13041.2|1.1e+02,PPR_3|PF13812.2|1.7,PPR_3|PF13812.2|3.4,PPR_3|PF13812.2|7.9,PPR_3|PF13812.2|0.33,PPR_3|PF13812.2|32,PPR_3|PF13812.2|1,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|9.3e+03,PPR_1|PF12854.3|0.33,PPR_1|PF12854.3|0.23,PPR_1|PF12854.3|4e+02,PPR_1|PF12854.3|0.87,PPR_1|PF12854.3|1.1e+02,PPR_1|PF12854.3|4.6e+02,PPR_1|PF12854.3|0.03,PPR_1|PF12854.3|1.2e+03,PPR_1|PF12854.3|1.6e+04 R_Transcript_243443:1-1323(+)
CASALVHLYAQCRLPDDARKVFDEMPERDEVCYSSVIVGFAQNSRPIDALTFFAQMVSRNVGSTVYSVSGALSAGAELAALEHCRVIHGHGLVTGLCRAVYVSTGLVTAYGKCGMVLEARRVFDESLQDMNIVGWNALMASYAQQGDKSSVLELFNLAESRGLEPDEFSFLAVLTALYNMGLADETEQWINRMKVDYSIEPSLEHYTCLVGALGRVGKLEEAERIANTMPVKPDAGVWRVLLSASATHRAADIAWRMSKRLLELEPHDDTAYVIAANTFSAAGRWNEAAEIRKMMNNVRVKKEGGRSWLELRGEVHVFLSGDNEHERIDETYAKLSELMVEIGKLGYVPNWNEMLHDVEEGEKREGLSYHSEKLALAFGVLTGAAPPGKPLRILKNLRICRDCHEAFKYFSRILEREIIVRDVNRYHRFLDGCCTCGDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST