Transcript Information: R_Transcript_24349.p3


Annotated TAIR IDAT1G50970.1
Annotated Gene NameMembrane trafficking VPS53 family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:18896323-18900268 | Forward length=569
E-Value6.3E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1408100596699
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.61214662368113
Replicate 20.55902204602964
Replicate 33.4034269913226
Condition 3: 24 Hour
Replicate 12.0088081324241
Replicate 20
Replicate 30.82078892575865


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_24349.p3 GENE.R_Transcript_24349~~R_Transcript_24349.p3 ORF type:complete len:80 (+),score=7.98,Vps53_N|PF04100.8|5e-13 R_Transcript_24349:110-349(+)
ATGATGTCGGTACCACGATCGATGGATAAATCAAGTGCTCTTGATTACATTAACCAGATGTTTCCCACTGAGGCATCACTATCTGGAGTGGAGCCTCTTATGCAAAAAATACACGGTGAGATTCGTAGGGTGGATGCTTCCATACTAGCAGCTGTTCGACAACAGGTACGAAAGCTAAAGAAGATCTTGCTGCTGCCACACATGCAGTGGAGGAACTCATGTACAAAATACGAGAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_24349.p3 GENE.R_Transcript_24349~~R_Transcript_24349.p3 ORF type:complete len:80 (+),score=7.98,Vps53_N|PF04100.8|5e-13 R_Transcript_24349:110-349(+)
MMSVPRSMDKSSALDYINQMFPTEASLSGVEPLMQKIHGEIRRVDASILAAVRQQVRKLKKILLLPHMQWRNSCTKYEK*

Click here to download the sequence:
Link to NCBI Protein BLAST