Transcript Information: R_Transcript_24405.p1


Annotated TAIR IDAT2G06990.1
Annotated Gene NameRNA helicase, ATP-dependent, SK12/DOB1 protein
Annotated Gene Symbol(s)HEN2
Annotation TypeOrtholog
Chromosome Positionchr2:2895135-2900909 | Forward length=995
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 123.108937359653
Replicate 216.757424671876
Replicate 319.081744620191
Condition 2: 8 Hour
Replicate 117.78690189564
Replicate 220.272459857905
Replicate 322.997748172811
Condition 3: 24 Hour
Replicate 125.448512728823
Replicate 221.493473994308
Replicate 325.212157945945


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_24405.p1 GENE.R_Transcript_24405~~R_Transcript_24405.p1 ORF type:complete len:1060 (+),score=192.16,rRNA_proc-arch|PF13234.2|5.1e+02,rRNA_proc-arch|PF13234.2|1.1e-68,DSHCT|PF08148.8|2.2e+03,DSHCT|PF08148.8|3.2e-45,DEAD|PF00270.25|3.6e-18,Helicase_C|PF00271.27|2.1e-06,Helicase_C|PF00271.27|2.8e+02 R_Transcript_24405:111-3182(+)
ATGGCGGACTCTCTCCCCCCCCCCACCCCCCCCCCCCAACCACCCCCACCGCCCGAACCACCCCCAACCCCACCCCCACCAGAACCCACCACCACATCACCACCAACAGAACCAACCACCACATCACCACCATCAGCAAAGCGCAAACAACCCGAGCCCGAGCCCGAACCTCAACAACAACAACCAGAGAACCCAAACCAAAACCAATCAAAGCGTCGAAACTCAACGAGAACATGCGTACACGAGGTGGCAGTCCCAAAGGACTTCACCTCCACGCTCGATTCCTCCGTTCACGGAACCCTAGCTAACCCTAATTACACCGGCGAGATGGCCAAAAGCTACCCTTTCACCCTCGACCCTTTTCAATCAATCTCAATCGCCTGCCTCGAGCGCAACGAGTCAATCCTAGTCTCCGCTCACACCTCCGCCGGCAAGACCGCCATTGCCGAGTACGCCATCGCCATGTCCTTCCGCGAAAAGCAGCGCGTCATCTACACCTCCCCCTTAAAAGCCCTAAGCAACCAGAAATACCGCGAGCTCAACCAGGAGTTCTCTGACGTGGGCCTCATGACCGGTGACGTCACCATCTCGCCCCACGCCAGCTGCCTCGTCATGACCACCGAGATCCTACGCGGCATGCTTTACCGTGGCTCCGAGGTCCTCAAGGAGGTCGCCTGGGTCATCTTCGACGAAATCCACTACATGAGGGATAGAGAGAGAGGGGTAGTTTGGGAAGAGAGTATCATCTTCCTGCCACCTCAGATCAAGATGGTGTTCCTTTCGGCCACCATGTCGAATGCCACCGAGTTTGCTGAGTGGATTTGTAATATCCATAAGCAGCCTTGCCATGTGGTGTATACTGACTTCCGGCCTACCCCATTGCAGCATTATGTTTTTCCGGTGGGCGGGTCCGGCTTGTACTTGGTTGTTGATGAGAATGAGCTGTTTCGAGAGGATAATTTTGTTAAGCTTCAGGACACTTTTGTTAAGCCTAGTAGTGGGATTAAGGCTGCTGCGGCTAAGGCTAGTGGTCGGATTGGTAAACAAGGGTCCGCTTCAAAAGGCGGGTCGGATATTTACAAGATTGTCAAGATGATCATGGAACGCAAGTTCCAACCTGTCATTGTTTTTAGCTTCAGCCGAAGGGAGTGTGAACAGCATGCTATGTCTATGTCTAAGCTTGACTTTAATACGCAAGAAGAGAAAGACATAGTGGAGCAGGTTTTCCGAAATGCAGTTGTTTGTTTGAACGAAGAGGACAGGAATCTTCCTGCTATTGAGTTGATGTTGCCACTTCTTCAACGTGGAATTGCTGTTCATCATTCTGGGCTTCTTCCCGTTATCAAAGAATTGGTAGAGCTTCTTTTCCAAGAAGGGCTAGTGAAGGCCTTATTTGCCACGGAAACTTTTGCAATGGGGTTAAATATGCCAGCAAAAACTGTTGTTTTCACAGCTGTTAAGAAATTTGATGGTGATAGCCGTAGGTATATTGGATCTGGTGAGTATATCCAGATGAGTGGAAGAGCTGGTCGTCGTGGCAAGGATGATCGTGGTATTTGCATCATAATGATTGATGAGCAGATGGAAATGAATTCTTTGAGGGATATGGTGTTGGGTAAACCAGCTCCTCTTGTCAGCACTTTCAGATTGAGTTACTACTCAATTTTGAATTTGATGTGCCGTGCTGAAGGTCAATTTACTGCTGAACATGTTATTAGGAATTCTTTTCACCAGTTCCAGTACGAGAAGGCTTTGCCTGAAATTGGAAAGAAGATCGAGAAGCTTGAGCAGGAAGCTGCCATGCTTGATGCTTCTGGGGAGTCCAAAGTTGCGGAATACCATAAGATTAGACTTGATCTAGCCATACTTGAGAAGAAAATGATGTCAGAGATAACAAGGCCTGAGAGGATTCTTCGCTTTCTTGATCCTGGGAGACTGGTTAAGATACGTGAAGGAGGTACTGATTGGGGTTGGGGAGTTGTGGTTAATGTGGTGAAGCCTGTAGGAGCACGTGGTGGGGGCTATATAGTTGATACTCTGCTTCATTGCTCCCCTGGTTCAAGTGAGAATGGTTCTAGGCCTAAACCATGCCCCCCTCGTCCTGGGGAGAAGGGTGAAATGCATGTGGTTCCTGTGCAGTTGCCCTTAATTGCTGGTCTCAGTAAACTCCGGATTTCTATCCCCCCTGACCTTCGGCCAGTTGAGGCGAGGCAAAGCATACTTCTAGCTGTACAGGAACTAGAAAAACGTTTCCCTCAAGGCCTTCCAAAGCTTCACCCTGTGAAGGAAATGGAAATTGAAGAGAAGGAGGTTGTTGAGCTAATTAGTCAAATTGAGGAACTTGAGCAGAAGTTATATTCTCATCCAATGCACAGGTCACAAGATGTCCATCAAGTGAAATGCTTCCAACGAAAAGCAGAGGTCAATCATGAAATTCAGCAGTTAAAGTCGAAGATGCGTGAGTCTCAGCTTCAAAAATTTCGGGATGAGCTTAAAAATCGGTCTCGGGTCTTGAAGAAGCTTGGTCATATTGATGCGGATGGTGTTGTCTTGTTGAAAGGACGAGCGGCCGCATTGATAGACACTGGAGATGAACTTCTTGTTACAGAACTGATGTTTAATGGTACCTTTAACGATCTAGATTGTCATCAAGTTGCAGCTCTTGCAAGTTGCTTTATCCCAGGAGATAAATCAAATGAGCAGATTCATCTGAGAGCAGAACTTGCAAAACCCTTACAGCAACTCCAAGACAGTGCTAGAAGAATTGCAGAGATTCAACACGAATGCAGGTTGGAGGTAAATGTTGAAGAATATGTCGAGTCAACTGTCAGACCATATTTGATGGACGTTATTTACTGTTGGTCAAAGGGGGCCAATTTTTCTGAGGTAATCCAAATGACAGATATTTTTGAGGGAAGCATTATAAGACTTGCTAGAAGACTTGATGAATTTCTAAATCAGTTGAAGGCTGCAGCCAGTGCTGTTGGGGAGGCTGATCTTGAGAACAAGTTTGGTGCAGCAAGTGCAAGCCTTCGTCGTGGTATTATGTTTGCCAATTCTCTTTACTTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_24405.p1 GENE.R_Transcript_24405~~R_Transcript_24405.p1 ORF type:complete len:1060 (+),score=192.16,rRNA_proc-arch|PF13234.2|5.1e+02,rRNA_proc-arch|PF13234.2|1.1e-68,DSHCT|PF08148.8|2.2e+03,DSHCT|PF08148.8|3.2e-45,DEAD|PF00270.25|3.6e-18,Helicase_C|PF00271.27|2.1e-06,Helicase_C|PF00271.27|2.8e+02 R_Transcript_24405:111-3182(+)
MADSLPPPTPPPQPPPPPEPPPTPPPPEPTTTSPPTEPTTTSPPSAKRKQPEPEPEPQQQQPENPNQNQSKRRNSTRTCVHEVAVPKDFTSTLDSSVHGTLANPNYTGEMAKSYPFTLDPFQSISIACLERNESILVSAHTSAGKTAIAEYAIAMSFREKQRVIYTSPLKALSNQKYRELNQEFSDVGLMTGDVTISPHASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMRDRERGVVWEESIIFLPPQIKMVFLSATMSNATEFAEWICNIHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDENELFREDNFVKLQDTFVKPSSGIKAAAAKASGRIGKQGSASKGGSDIYKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDIVEQVFRNAVVCLNEEDRNLPAIELMLPLLQRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKFDGDSRRYIGSGEYIQMSGRAGRRGKDDRGICIIMIDEQMEMNSLRDMVLGKPAPLVSTFRLSYYSILNLMCRAEGQFTAEHVIRNSFHQFQYEKALPEIGKKIEKLEQEAAMLDASGESKVAEYHKIRLDLAILEKKMMSEITRPERILRFLDPGRLVKIREGGTDWGWGVVVNVVKPVGARGGGYIVDTLLHCSPGSSENGSRPKPCPPRPGEKGEMHVVPVQLPLIAGLSKLRISIPPDLRPVEARQSILLAVQELEKRFPQGLPKLHPVKEMEIEEKEVVELISQIEELEQKLYSHPMHRSQDVHQVKCFQRKAEVNHEIQQLKSKMRESQLQKFRDELKNRSRVLKKLGHIDADGVVLLKGRAAALIDTGDELLVTELMFNGTFNDLDCHQVAALASCFIPGDKSNEQIHLRAELAKPLQQLQDSARRIAEIQHECRLEVNVEEYVESTVRPYLMDVIYCWSKGANFSEVIQMTDIFEGSIIRLARRLDEFLNQLKAAASAVGEADLENKFGAASASLRRGIMFANSLYL*

Click here to download the sequence:
Link to NCBI Protein BLAST