Transcript Information: R_Transcript_244332.p1


Annotated TAIR IDAT4G04480.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast; EXPRESSED IN: flower, pollen tube; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: F-box family protein with a domain of unknown function (DUF295) (TAIR:AT4G22030.1); Has 78 Blast hits to 78 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2229649-2230845 | Forward length=398
E-Value2E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.22698703152755
Replicate 30.24764040644489
Condition 2: 8 Hour
Replicate 10.66178013370933
Replicate 20.24173926314795
Replicate 30.29435044249276
Condition 3: 24 Hour
Replicate 10
Replicate 20.71530569374845
Replicate 30.23662383445294


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_244332.p1 GENE.R_Transcript_244332~~R_Transcript_244332.p1 ORF type:5prime_partial len:185 (+),score=58.65,Chloroplast_duf|PF14476.2|2.9e-65 R_Transcript_244332:1-555(+)
AAGAAATCCACATCATCATCACCAAGAGGGCTCAAGTCATCAATGCAATATGTCAATGGAGAGAAGGTGAATGGGTGGAGTGAAGGATTGGAGGAAGATATGAAGGAAATTGTGGGAGTCATAAGAAGTAAGGACATGGAAGATTATGTTAGATTAGGGAACAAGGCATTGGGGTTGAACAAGACACTGGCTGTTTCAGGCCCAATATTGATGGGCCTAGCAGCCGTGGGGTCCGCTTTCGTGGGCCACGGTGGTGGGGTGGTAGCGGCGGTGGTGGGTTCATTGGCTACCATTGTGAACACAATAGAGCATGGTGGACAAGTAGGGATGGTGTTTGAGATGTATAGGAATTGTGGTGGGTTTTTCAACCTCTTGCAAGAGACAGTTGAGTCTAATTTAGAAGAGGAAGACTTGGAGAAGAGAGAAAATGGGGAGATATTTGAGATGAAGATGGCTTTGCATTTGGGGAGGAGCTTGTCTGAGCTTAGAGATTTGGCAGGCAAATCAAGGAGAAATGGAGGGCCTGTTAATGAATTTGCAAACAAGCTCTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_244332.p1 GENE.R_Transcript_244332~~R_Transcript_244332.p1 ORF type:5prime_partial len:185 (+),score=58.65,Chloroplast_duf|PF14476.2|2.9e-65 R_Transcript_244332:1-555(+)
KKSTSSSPRGLKSSMQYVNGEKVNGWSEGLEEDMKEIVGVIRSKDMEDYVRLGNKALGLNKTLAVSGPILMGLAAVGSAFVGHGGGVVAAVVGSLATIVNTIEHGGQVGMVFEMYRNCGGFFNLLQETVESNLEEEDLEKRENGEIFEMKMALHLGRSLSELRDLAGKSRRNGGPVNEFANKLF*

Click here to download the sequence:
Link to NCBI Protein BLAST