Transcript Information: R_Transcript_244333.p1


Annotated TAIR IDAT4G04480.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast; EXPRESSED IN: flower, pollen tube; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: F-box family protein with a domain of unknown function (DUF295) (TAIR:AT4G22030.1); Has 78 Blast hits to 78 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:2229649-2230845 | Forward length=398
E-Value1.4E-118
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0927493254488
Replicate 20.88454480689504
Replicate 31.218983818864
Condition 2: 8 Hour
Replicate 11.7916486546765
Replicate 20.74371003906382
Replicate 30.52321715757213
Condition 3: 24 Hour
Replicate 10.10180845777252
Replicate 20.73354519591721
Replicate 30.24265747989908


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_244333.p1 GENE.R_Transcript_244333~~R_Transcript_244333.p1 ORF type:complete len:451 (+),score=86.17,Chloroplast_duf|PF14476.2|2.6e-142 R_Transcript_244333:90-1355(+)
ATGTCTTCAATGACAAAAAATTTACTAGTACTACCGCACAAAAATATTAATATGGTTGGTTCTAACATGAGAGTTAGATCAACTATATCAATCCCGAAGCTGTCAGATGGTAAGCTATTGAGAGATCTAAACAAGTCAAACAATACCCTCTCCAAGAAAATCACAAGAACAAAAAATATCCCATTGGAGACCAAAACCCTAACACAAGAAGTCAAGATTGATAATATTGACCAAAACACCACCAAGTTACATGTAGTTTTGGAAGCAGTGTTAGATAGGATAGAGATGCACCACAACATAGGCAAGCAACGTGAGAATTGGAATTCCTTGTTGCTGAACTCCCTTAACATGGTCACCCTTACAGCCACCACCATGGCCGGCCTTGCCGCGACGATGGGTGGCGGAGGGGCCCACATTCTCACCTTGAAAATATCTTCATTCATGCTCTTTGCGGCCGCCACCGGAATCGTTATGATAATGAACAAGATACAGCCATCTCAGCTTGCCGAGGAGCAGAGGTGTGCAGTGAGGCTGTTGAAGAAGCTCCGAAACAAGATCCAAACCACACTCTGTCTCCAAAACCCTACGCAGAAGAAGGTTGAAGATGCCATAGAGAATATGTTAGCCATTGATAGGGCATACCCGCTTCCTCTGCTGGGCGTTATGCTTGAAAAATTCCCTGACACCTACAAGCCTTCCGCTTGGTGGGCCTCCAAAAAATCATCACCGCCATCATCACCACCACCAGAAGGAGTTAAAACAGAGGAGGAAGTGACCACCAATGGGTGGAGTAGTGAGTTGGAGCAAGAGATGAGAGAAATAATGGGAGTGGTAGAAAACAAGGACTTGGAAGATTACTATAGATTAGGGAACAAGGCATTGAAATTAAACAAGACACTAGCAATGTCAGGCCCAATACTGATGGGCCTAGCAGCAGTGGGGTCCGCTTTCATGGGCCATGGTGGTGGGGTGGTGGCGGCGGTGGCGGGTTCATTGGCTACCATTGTGAACACAATAGAGCATGGTGGACAAGTAGGGATGGTGTTTGAGATGTATAGGAATTGTGGTGGGTTTTTTAAGCTCTTGCAAGAGAATGTTGAGTCTACTTTAGAAGAGGAAAACTTGGAAAAGAGAGAAAATGGGGTGATATTTGAGATGAAGATGGCTTTGCATTTGGGGAGGAGCTTGTCTGAGCTTAGAGATTTGGCAAGCAAATCAAGGAGAAATGGAGGGTCTGTTGATGAATTTGCAAGCAAGATGTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_244333.p1 GENE.R_Transcript_244333~~R_Transcript_244333.p1 ORF type:complete len:451 (+),score=86.17,Chloroplast_duf|PF14476.2|2.6e-142 R_Transcript_244333:90-1355(+)
MSSMTKNLLVLPHKNINMVGSNMRVRSTISIPKLSDGKLLRDLNKSNNTLSKKITRTKNIPLETKTLTQEVKIDNIDQNTTKLHVVLEAVLDRIEMHHNIGKQRENWNSLLLNSLNMVTLTATTMAGLAATMGGGGAHILTLKISSFMLFAAATGIVMIMNKIQPSQLAEEQRCAVRLLKKLRNKIQTTLCLQNPTQKKVEDAIENMLAIDRAYPLPLLGVMLEKFPDTYKPSAWWASKKSSPPSSPPPEGVKTEEEVTTNGWSSELEQEMREIMGVVENKDLEDYYRLGNKALKLNKTLAMSGPILMGLAAVGSAFMGHGGGVVAAVAGSLATIVNTIEHGGQVGMVFEMYRNCGGFFKLLQENVESTLEEENLEKRENGVIFEMKMALHLGRSLSELRDLASKSRRNGGSVDEFASKMF*

Click here to download the sequence:
Link to NCBI Protein BLAST