Transcript Information: R_Transcript_244404.p1


Annotated TAIR IDAT5G50170.1
Annotated Gene NameC2 calcium/lipid-binding and GRAM domain containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:20421150-20425524 | Forward length=1027
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.69608749403588
Replicate 20.14827895774222
Replicate 30.45295808805951
Condition 2: 8 Hour
Replicate 10.34584555010233
Replicate 20.44216433019293
Replicate 30.5896709664815
Condition 3: 24 Hour
Replicate 10.64852562790125
Replicate 20.65418140777136
Replicate 30.71104125395288


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_244404.p1 GENE.R_Transcript_244404~~R_Transcript_244404.p1 ORF type:3prime_partial len:708 (+),score=136.85,C2|PF00168.26|5e-16,C2|PF00168.26|6.5e-16,DUF4782|PF16016.1|1.5e-31 R_Transcript_244404:355-2475(+)
ATGAGGTTGTATGTATATGTGTTAGAAGCCAAGGATTTGCCCGTGAAGGGAAGCAGCTATGCCAAGCTTCAACTTGGTAAATCCAAGTTCAAGACCCGGATTGTTAAAAACGGGTATGGGTCTGACCCGGTTTGGAATGAAGAGTTTGTATTTCGGGTTCATGATATGGAAGATGACCTGCTACTCTCAATTTACCACCATGATGATCATTCCCGTTTGTTTAACGTTTCTGGGTATTTGGTGGGTCAGGTTCGGATCCCCGTTTGGACCGTTGCTGATGAACACAATCACTGTTTACCTCCATCTTGGTTTTCTCTTGAGAAGCCCAAAACTGCCAAACGTTCTAAAACCACTTATTATGGAAAAATACTTCTCACTCTCTCTCTTCATGGAAGAGGAGAAGATGACGATATTACAGATCACCCCTTGCCTGTACATCCAACTGTCAGATCATTTGATGGTGAACAATGCGAAAGCCCAGATCGTATATCTGTACGTACTTCTTCTCCTACAGTTCCCTCTAAGAAGATCCCTCAAGGGAGGAAGTTTATGAAGGTTGTTACTAATCGTTTGAAAAAGCTTTTACACAAAAACGGAGAATCCTCTAGGAGCGATGAATCTTCAGACTTTAGTGTTACTCCTTCTGAGTATGAATATTGTACAGAAGAGGAACCGTCCACATCTAATAGCTTTGAAGAAGCTATGAATATGATGCAATCAAGAGAGGGGGAGCAAGAAATGCCTGAGAACCTGCACAGTGGAGTACTTCTTGATCAGATGTATGAGGTCACCTCGAAAGATTTGAATGCCCTTCTTTTTGCTCCAAATTCACAGTTTAGGAGAGAGCTGGCAGAGATGCAGGGAATAACTGATATGCAAGAGGGTCCGTGGACTTGGAAATCAGGCAATTCATCATGTTTAACGCGAGTTGTCACTTACACAAAACCTGCAACCAAGCTAGTTAAGGCTGTCAAAGCCACTGAGGAGCAGACTTATGTTAAAGCTGATGGTTGTGAGTTTGCTATTTTTGTAAGTGTAGATACACCGGATGTGCCATATGGAAGTGCATTCAAGGTTGAGTTACTCTACAAGATAATGCCTGGGCCTGAGTTATCTTCAGGCGAAGAGACCTCCCGCCTCATAATTTCTTGGGGCATTACCTTTACTCAGAGTACCATGTTGAGAGGTATGATTGAGGGAGGAGCAAGACAAGGTATAAAGGAGAGCTTTGACCAGTTTGAGAGCTTACTGGCTCAGAAGCTTAAAACCCTGGAAACAGCGGACTCAATGGGGAAGGATCATGTCTTGGCAGCTCTTGAAAAGGAACACCAATCAGATTTCGGGTTGGCTGCTGAATACTTTGGGAACCTCACTGTACTGTCTGCCACCTTACTTTCATTATATGTGTTGGCTCATATTCTACTTTGTGAGCCCCACAAGCGTCAGGGACTGGAGTTTGCTGGCCTTGATTTGCCTGACAGCTTTGGGCAGGTCATCACTTGTGGAATTTTAGTACTTCTGTTAGAGCGTATGTATAACATGGTTTCACACTTCATAGAAGCCAGGTTACGCATAGGAAGTGATCATGGTATTAAATCTCAAGGTGATGGGTGGGTTGTTACTGTTGCTCTGGTTGAAGCTTCTAACTTACCGTGCGTGGATTCAACAGGATTTTCGGATCCCTTTGTTGTTTTAACCTGCAATGGTAAAACGAGAACAAGCTCTATCCAGCTTCAAACATGTGATCCACAATGGAATGAGATACTCGAGTTTGATGCTTCAGAAGAGCCACCGTCAGTTCTTGATGTAGAAGTTTTTGATTTTGACGGCCCTTTTGATCAAGCAGTCTCACTTGGCCATGCAGAGATAAGTTTTCTGAAGCTCACTGCCGCAGAATTGGCTGATATGTGGGTTCCTCTTGAAGGGAAACAGGCTGTTTCGTCTCAGTCGAAATTGCATTTGAGAATCTTTTTGGAGAACAAAAACGGTGTTGAAACAATCAAAGAGTACCTAACAAAAATGGAAAAGGAAGTTGGGAAGAAGTTGAATCTTCGGTCTCCCCACAAAAACTCGGCATTTCAGAAGCTATTTGGATTGCCACCAGAAGAATTCTTGATTAAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_244404.p1 GENE.R_Transcript_244404~~R_Transcript_244404.p1 ORF type:3prime_partial len:708 (+),score=136.85,C2|PF00168.26|5e-16,C2|PF00168.26|6.5e-16,DUF4782|PF16016.1|1.5e-31 R_Transcript_244404:355-2475(+)
MRLYVYVLEAKDLPVKGSSYAKLQLGKSKFKTRIVKNGYGSDPVWNEEFVFRVHDMEDDLLLSIYHHDDHSRLFNVSGYLVGQVRIPVWTVADEHNHCLPPSWFSLEKPKTAKRSKTTYYGKILLTLSLHGRGEDDDITDHPLPVHPTVRSFDGEQCESPDRISVRTSSPTVPSKKIPQGRKFMKVVTNRLKKLLHKNGESSRSDESSDFSVTPSEYEYCTEEEPSTSNSFEEAMNMMQSREGEQEMPENLHSGVLLDQMYEVTSKDLNALLFAPNSQFRRELAEMQGITDMQEGPWTWKSGNSSCLTRVVTYTKPATKLVKAVKATEEQTYVKADGCEFAIFVSVDTPDVPYGSAFKVELLYKIMPGPELSSGEETSRLIISWGITFTQSTMLRGMIEGGARQGIKESFDQFESLLAQKLKTLETADSMGKDHVLAALEKEHQSDFGLAAEYFGNLTVLSATLLSLYVLAHILLCEPHKRQGLEFAGLDLPDSFGQVITCGILVLLLERMYNMVSHFIEARLRIGSDHGIKSQGDGWVVTVALVEASNLPCVDSTGFSDPFVVLTCNGKTRTSSIQLQTCDPQWNEILEFDASEEPPSVLDVEVFDFDGPFDQAVSLGHAEISFLKLTAAELADMWVPLEGKQAVSSQSKLHLRIFLENKNGVETIKEYLTKMEKEVGKKLNLRSPHKNSAFQKLFGLPPEEFLIK

Click here to download the sequence:
Link to NCBI Protein BLAST