Transcript Information: R_Transcript_244425.p1


Annotated TAIR IDAT3G01680.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Mediator complex subunit Med28 (InterPro:IPR021640); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01670.1); Has 122 Blast hits to 112 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:252033-255246 | Forward length=740
E-Value4E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.35373955338602
Replicate 20.24414302809649
Replicate 30.1775716092725
Condition 2: 8 Hour
Replicate 10.094906453283896
Replicate 20.086670084655758
Replicate 30.14071015984796
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.16967212935579


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_244425.p1 GENE.R_Transcript_244425~~R_Transcript_244425.p1 ORF type:5prime_partial len:258 (+),score=54.75,SEO_N|PF14576.2|1.4e-36 R_Transcript_244425:3-776(+)
ATAAGCTTAGCAGCCTTTGCAGTTTCATATGGAAAGCAGGGACTTGTGGTTCTCCTGAACGCCGCAAACCCCTTGGCTAGCTCCATCTCTTTGCTTGAACAGACGGCCGAGATCATCAACTTTGATATCCCTGATGATCTCATTAAGGACATGGTGGCTGTGGCTAAGTCCCTCATCGTCATTCGAGCATTGCATCCTTTCAAGTACATCACCCCTGAAGAGCCTCTCTACTCTAAGGCTCAAAATCACATTGCATCTGCTACTTATTGGACTATTAGGAGCATTGTTGCTTGTGGGGCTCAGATTACGGGCAACATTTTCACTTCCGGGTCACAACAGGATTCAACTGTAGAACCTTGGAACCTTTCTAACTTGGCATACAAAGAGAAGATGATGCTTGACCAGCTCAACAAGTTAATTGATCAATCTCGTAAAGAAATAGAGGAAAAGAAAAGAGAGAAAAGATACAAAGACTTGAAGCAAGCCTTCTTGGAGAGACCCACCGGCGTTGTGAATGCCCTCAGGAAACTAATCAACCCAGATGAGCAGCCAGATGACAAGAACAAGCCCCTCGTCAAAACTCGTTTCCCCAGCCAACAAATTGAACAACAAGTCAATGTTGATGTGCTCAAGGACCAAATGTTGTTGCTCCTCGTAACAGATCTTACTGTCTCCGATGAGGAGCTGACGACCTTGAGGGAAATTTACACGGAGTCGAGGAAGAAAAAAGATTTGCGATATGAGGTGCTTTGGCTCCCGGTAGTTGATGATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_244425.p1 GENE.R_Transcript_244425~~R_Transcript_244425.p1 ORF type:5prime_partial len:258 (+),score=54.75,SEO_N|PF14576.2|1.4e-36 R_Transcript_244425:3-776(+)
ISLAAFAVSYGKQGLVVLLNAANPLASSISLLEQTAEIINFDIPDDLIKDMVAVAKSLIVIRALHPFKYITPEEPLYSKAQNHIASATYWTIRSIVACGAQITGNIFTSGSQQDSTVEPWNLSNLAYKEKMMLDQLNKLIDQSRKEIEEKKREKRYKDLKQAFLERPTGVVNALRKLINPDEQPDDKNKPLVKTRFPSQQIEQQVNVDVLKDQMLLLLVTDLTVSDEELTTLREIYTESRKKKDLRYEVLWLPVVDD*

Click here to download the sequence:
Link to NCBI Protein BLAST