Transcript Information: R_Transcript_24452.p1


Annotated TAIR IDAT1G29340.1
Annotated Gene Nameplant U-box 17
Annotated Gene Symbol(s)PUB17, ATPUB17
Annotation TypeOrtholog
Chromosome Positionchr1:10264412-10266601 | Forward length=729
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.69367802853
Replicate 210.907548823509
Replicate 312.889027839618
Condition 2: 8 Hour
Replicate 110.537788675068
Replicate 217.720531709797
Replicate 323.182488772834
Condition 3: 24 Hour
Replicate 116.626824176053
Replicate 211.30408812219
Replicate 315.668913940202


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_24452.p1 GENE.R_Transcript_24452~~R_Transcript_24452.p1 ORF type:complete len:718 (+),score=166.54,U-box|PF04564.11|1e+04,U-box|PF04564.11|1.2e-20,Arm|PF00514.19|1e+04,Arm|PF00514.19|9.1e-06,Arm|PF00514.19|26,Arm|PF00514.19|0.0047,Arm|PF00514.19|0.13,Arm|PF00514.19|13 R_Transcript_24452:752-2905(+)
ATGGCTACAGCAGCTGCATTTGCTTCATTAAGGAGAAGAAGATCCCCTTCATTAGAAGCATTTTTAGCTCCAGTAGACCTAACAGATGGTGGGTTAATTGGGACTTTATCATCAGTATCAAAAGATTTGATTTTGTCATTTTCTGGTAAGAAATTGGCTTTTCAAAGGAAGAATTCTGTTACTTTGATTAGGAGACTTGAAGTTTTTGTTGTGTTTTTGGAGTATTTGAAGGAATTCAGGTCAGTTTCTAGGTTCTCATATACAGCTATTGTATGCTTTAAAGAGCTTTATCTACTATTCTATAGATGTAAGATATTGTTGGGTTATTGCTCAAAATCTAGTAATTTGTGGTTACTCCTTCAAAACCAAGCAATTTCAGGGCATTTTCATGACCTTAACCAAGAAATGTCAACAGTTTTGGATGTTTTGCCTATGAAAGAGCTTTGTTTGAGTGAGGATGTTAGGGAACAAATTGAATTGTTGCAAAAACAATTGAGGAGGGCTAAGTTTTTTGTTGATAAACATGATGAAGGGTTAAGGCGAAGGCTGTATTCGTTCTTAGATGAGTTTGAGAAGGGAAAGATACCTGATTCGAATGACCTTCGGTCGTTTTTCATTAATGAAGTTGGTATTCGAGATGCTAAAACTTGTAGGAGGGAGATTGAGTTCTTGGAGGAACAAATGGTTAACCATGAGGGGGATATTGAGCCTACATCTGCTGTTCTTAATGGGTTTGTGGCTCTTGTGCGGTATTGCAGGTTCTTGCTGTTTGGGTTTGGGAAGGATGAGGTGGAAGTTGAAATTGGGAGCCAAAGGAGGATGAGGAAAGGTGGGGTTGTTAATGAGGAAATTGCTGACACTTTCCTTACTATTCCGAAGGATTTCTGCTGCCCCATATCGTTGGATTTGATGCGCGATCCAGTGATTGTATCCACAGGGCAGACCTATGATCGGTCTTCGATAGCAAGGTGGATGGATGAAGGGCATTCCACTTGTCCAAAGACAGGACAAATGCTTGCCCATGCCCGTTTGGTCCCTAATCGAGCTCTCAGGAACCTGATAATGCAATGGTGTTCGGCCAATGGAGTTCCATTTGATCCCCTTGAGGGTTCAGATTCATCGTCGGAGTTGGCTTGGGCTTCGTCCTCAAAGGCAGCCATCGAAGCCAACAAGGCTACTGCCAATCTTCTTATCCAACAACTGGCTGTTGGGTCAGAGGATGCTCAAACTATTGCTGCTCGGGAAATCAGGCTGTTGGCCAAGACGGGGAGGGAGAACCGAGCTTTCATTGCTGAGGCTGGTGCAATCCCTCATTTGAAGAAGCTATTGTTGTCGAAGAACACGATTGCTCAAGAGAATTCGGTCACAGCTATGCTTAACTTGTCGATATACAACAAGAACAAGAGCAGAATAATGGAGGAACAGGGATGCCTGGAGTCAATTGTCGACGTGTTGAGAAACGGTCACACAACCGAGGCAGTAGAGAATGCTGCCGCCACGCTGTTTAGCCTGTCAGCAGTTCATGATTACAAGAAGAGAATAGCACAAGAAAACGGAGCAGTTGAGGCTCTTTCCGAGCTCTTGAGGGAAGGAACCCCTCGAGGGAAGAAAGACGCAGTCACAGCTTTATTCAACCTCTCCACACACCCGGAAAACTGCGTGAGGATCATCAAGGCAGGGGCAGTGGGAGCACTAGTCGAGGCTATGGAGGTTGAGGGAGTGTCAGAAGAGGCTGCAGGCGCGTTAGCCTTGATCGTAAGGCAGCCAGTTGGGGCTGAGGCCGTTGGGAAGGAGGAGATGGCGGTGGCTGGTCTGCTTGGGATGATGCGTTGTGGGACCCCTCGAGGGAAGGAGAACGCAGTTGCTGCATTGCTGGAGCTGTGTCGGAGTGGTGGCGCTGCTGCCACTGAGAGAGTGCTCAAGGCACCAGCATTGGCTAGTTTGCTCCAAACCCTACTGTTTACCGGGACCAAACGAGCTAGACGAAAGGCGGCTTCTCTTGCTCGGGTTTTCCAGAGGAGAGAACATTCAGCAGTTCGGTATAATGGAATTGGAATGGGATATGGTTTTGCTGGTAACTCAGCTACTAATAGAGATACAGGGTTTGCTGGTGATGTTTCAGTGCCCATGTCAATATCAGTTCCAGTTGTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_24452.p1 GENE.R_Transcript_24452~~R_Transcript_24452.p1 ORF type:complete len:718 (+),score=166.54,U-box|PF04564.11|1e+04,U-box|PF04564.11|1.2e-20,Arm|PF00514.19|1e+04,Arm|PF00514.19|9.1e-06,Arm|PF00514.19|26,Arm|PF00514.19|0.0047,Arm|PF00514.19|0.13,Arm|PF00514.19|13 R_Transcript_24452:752-2905(+)
MATAAAFASLRRRRSPSLEAFLAPVDLTDGGLIGTLSSVSKDLILSFSGKKLAFQRKNSVTLIRRLEVFVVFLEYLKEFRSVSRFSYTAIVCFKELYLLFYRCKILLGYCSKSSNLWLLLQNQAISGHFHDLNQEMSTVLDVLPMKELCLSEDVREQIELLQKQLRRAKFFVDKHDEGLRRRLYSFLDEFEKGKIPDSNDLRSFFINEVGIRDAKTCRREIEFLEEQMVNHEGDIEPTSAVLNGFVALVRYCRFLLFGFGKDEVEVEIGSQRRMRKGGVVNEEIADTFLTIPKDFCCPISLDLMRDPVIVSTGQTYDRSSIARWMDEGHSTCPKTGQMLAHARLVPNRALRNLIMQWCSANGVPFDPLEGSDSSSELAWASSSKAAIEANKATANLLIQQLAVGSEDAQTIAAREIRLLAKTGRENRAFIAEAGAIPHLKKLLLSKNTIAQENSVTAMLNLSIYNKNKSRIMEEQGCLESIVDVLRNGHTTEAVENAAATLFSLSAVHDYKKRIAQENGAVEALSELLREGTPRGKKDAVTALFNLSTHPENCVRIIKAGAVGALVEAMEVEGVSEEAAGALALIVRQPVGAEAVGKEEMAVAGLLGMMRCGTPRGKENAVAALLELCRSGGAAATERVLKAPALASLLQTLLFTGTKRARRKAASLARVFQRREHSAVRYNGIGMGYGFAGNSATNRDTGFAGDVSVPMSISVPVV*

Click here to download the sequence:
Link to NCBI Protein BLAST