Transcript Information: R_Transcript_244539.p1


Annotated TAIR IDAT3G22104.1
Annotated Gene NamePhototropic-responsive NPH3 family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:7789814-7792179 | Forward length=506
E-Value1E-118
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.23705144097037
Replicate 20.50640427720199
Replicate 30.38248726969457
Condition 2: 8 Hour
Replicate 10.22714160433437
Replicate 20.41485866124649
Replicate 30.77455852368998
Condition 3: 24 Hour
Replicate 10.80927335311016
Replicate 20.40918847663409
Replicate 30.77155174220974


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_244539.p1 GENE.R_Transcript_244539~~R_Transcript_244539.p1 ORF type:complete len:539 (+),score=73.55,NPH3|PF03000.10|5.6e-54 R_Transcript_244539:250-1866(+)
ATGGAAGCTTGTTGTGACCTTGAAGTAGATGTCAATGGCCACCAAATTTTCTTGCTTAACAAGAAAATTTTAACATCATTTTCGAGCAAGCTGAACCACTTGTTTATGAAGAGGGTAAACAGGGCTAAGAGGAACAATATGAAAGTGATATTTCAAGATTTTCCTGGTGGACCAGCTGCCTTTGAGCTCATTGCAAGGTTTTGCTACAACAATGGAATCATTGAGATAACTCATTCAAATGTTGTCATTCTAAACCATGTTGCCAAATACATGGAAATGAATAAGAATGTGCTAGGAAGGTCCAACTTGATAAACCAAACAGAGAAATTTCTTGCAAGCCTTGATTGTTGGACTTGGTCTGAGCTCATACTAACATTGAATCAAACCCAACATTTCTCGATCGATATCAATTCTGTATCTTGTCTCCCAAGATTAGTAGATGAGCTTGTTGAAAGGCTTGCATTGCCTTGCATGACAACCCCTTCTTCCCTCTCCTCTAAGTGCTCTAGTTTTCGCTCCTCGTGCGATTCTAAGAGCACTCAAAGTCCTATACAGAGTGGTTTTCGACGATTTTGGTGGTTTGAGGATCTCTTAGAACTTGATATTTGTTTGATTGATATGTTAGTAAGGAAAATGGTGGTAGAAAAAATCGATCATACTACCATAAGTAGATTGTTGTTTTACTATCAAAGGTTTAGATTTCGCGGTGCCTCAAAATTTCTAAGGGTTGAAATCATCCAAAGGGTAATCAACCTACTTTGTCTCCTTGATTACAGAAGCATTTCCATCAAGGGATTGTTTGATACCTTGAGAATAGCTTCAAGTTTGAAGCTAAGGAAATGTTGTAAGGGTCAATTAGAGCTCTTAATTGGTTCGCAACTCGATCAAGCTGCATTGGATGATTTGCTTCTTCCATCTCCCCATGGGAAAAAGTATAACATGCAGTATAATGTGAATCTTGTGTTAAGGTTCTTGAAGAATTTTTTACTTGAAGGGAATATTAGCTATAAGCTTTGTTCATATCGACTGAAGAAAGTAGCTAGATTAGTGGACTTATATGCTAGTGAAATTGCTCCGGATACTATATTGAAACCCTCCAAGTTTGTTGCACTTGCCATGGTTATCCCTGATTCAGCTCGAGATTCATACGACAAGATCTATCAAGCCATAGAAATCTACCTTGAGGCTCATCCAAGGCTTGGTGAAGAACAAAAGATGAAAGTATTTTCTGTCCTGAACTACAACAAGCTTTCACCACAAGTACTAAATCAGTTGTCACGAAATACAAGTTTCCCACTGATAGCGATTGTAAAAGCTTTGGTTCATCAAAATCCTAAGCTAAAAAGCTTAGTCAAAGATGCATATCTTCTCAAATTCTTTAGCGGTTTCGGATTTGCTGGCCATGAAGCAAGGGAATTCATGATCCAAAATGAAGTTCTTTTCAAGGAATTGTCAAGAAATGAGAAGCTTAAATTGCATCTACAACAAATGGGATGGACCGCTATGGAGTTGGAGAAGATTTTTGGTAAATTGCAAAGTCAAGATATTGGACCTGTTACGACACCAAAAGTGTGTTGCTTGCATAACGTCAAACATTTGCCAAAGCTTTGTTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_244539.p1 GENE.R_Transcript_244539~~R_Transcript_244539.p1 ORF type:complete len:539 (+),score=73.55,NPH3|PF03000.10|5.6e-54 R_Transcript_244539:250-1866(+)
MEACCDLEVDVNGHQIFLLNKKILTSFSSKLNHLFMKRVNRAKRNNMKVIFQDFPGGPAAFELIARFCYNNGIIEITHSNVVILNHVAKYMEMNKNVLGRSNLINQTEKFLASLDCWTWSELILTLNQTQHFSIDINSVSCLPRLVDELVERLALPCMTTPSSLSSKCSSFRSSCDSKSTQSPIQSGFRRFWWFEDLLELDICLIDMLVRKMVVEKIDHTTISRLLFYYQRFRFRGASKFLRVEIIQRVINLLCLLDYRSISIKGLFDTLRIASSLKLRKCCKGQLELLIGSQLDQAALDDLLLPSPHGKKYNMQYNVNLVLRFLKNFLLEGNISYKLCSYRLKKVARLVDLYASEIAPDTILKPSKFVALAMVIPDSARDSYDKIYQAIEIYLEAHPRLGEEQKMKVFSVLNYNKLSPQVLNQLSRNTSFPLIAIVKALVHQNPKLKSLVKDAYLLKFFSGFGFAGHEAREFMIQNEVLFKELSRNEKLKLHLQQMGWTAMELEKIFGKLQSQDIGPVTTPKVCCLHNVKHLPKLCS*

Click here to download the sequence:
Link to NCBI Protein BLAST