Transcript Information: R_Transcript_244746.p1


Annotated TAIR IDAT1G23980.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:8484879-8485988 | Reverse length=369
E-Value6.2E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.2732967500142
Replicate 27.791828199816
Replicate 37.0082936554801
Condition 2: 8 Hour
Replicate 16.6590454247466
Replicate 26.2078368850883
Replicate 38.4844638877163
Condition 3: 24 Hour
Replicate 111.771566878795
Replicate 29.3094435543796
Replicate 310.912849928878


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_244746.p1 GENE.R_Transcript_244746~~R_Transcript_244746.p1 ORF type:complete len:353 (+),score=19.04,zf-RING_2|PF13639.2|1.3e+04,zf-RING_2|PF13639.2|9.3e-14,zf-RING_11|PF17123.1|1e-09,zf-rbx1|PF12678.3|5.7e-08,zf-C3HC4|PF00097.21|1.2e-05 R_Transcript_244746:91-1149(+)
ATGAATCTCTCACCGCCGCCGCCGCCGCTACAACCACCATCTTCTCTATTCCACCTCCCAATCCATACATCATCAGGCAACAGTTTCCCCGTCATAGCAATCGCGCTAATCGGAATCCTAGCCACTGCATTCTTACTAGTAGGCTACTATGTCTTCGTTATCAAATGCTGCTTAAACTGGCACCGTCTCAACGTCCTCTCGAGATTCTCCTCTCGCCGTCATCATTCCCCCAACGACGCAGTTTCCTCCTCCGAAGACGCCCCTAAGGGCCTCGACGAGGCCGTCATCCGCTCTATCCCCGTCATCAAGTTCCGCAAGCTCCCCGAGCAAGAAAGAGGAGCAGACACTATCAACAGAAAGAACATAAACCAAACCATTTCTAAAAGCACGAATACTAGTAATACTTACGAATGTGCAGTTTGTTTGAGCGAGTTTGAAGACGATGAGAGGCTCAGAGTGATTCCCAATTGTTGTCACGCTTTCCACATCGACTGTATCGATGTTTGGCTACAAAGCAACGCTAACTGCCCGCTTTGTAGATCCACCATTTCTGTCTCTTCTATCCTCTACAACAATGTCGACCGGATCTCGTTAAACCCTCCTCCTAGACCATTGTCGCCACCTGCCCCTTGTGCTGGTGGCGACAATGCGGATGACGACAGTGATTATGTCGTCATCGAAATCCAAGGAAACAATCTCGATCACCCGAGATTCGTCTCCGAGGAAATGTTTTTACAAGATAAGAAGAAACACGGAAAGAAGAAGTTGGAACACGTGTGCAGTATGGGGGACGAGTGGATTGATATGAGAAAGAAAGATGAAGAGTTTAAGGATGTTGTTCAGCCCATCAGGAGGTCCATTTCTATGGATTTGTCAGTTGATCGAGAATTTTGGCTTGAAATTCAGCAATGTAGCAGTAAGTTGGTCTGCTCTGAAGATTATAGTAGTACTCCTAATATTAGTGGTAGCAAAGTGAGAAGATCTATTTTCTCTTTTGGTCATGGCAGACGAAGTTCTCGAGGTTCTAATTCTGTTCAACCTCTTCATTTAGATCCGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_244746.p1 GENE.R_Transcript_244746~~R_Transcript_244746.p1 ORF type:complete len:353 (+),score=19.04,zf-RING_2|PF13639.2|1.3e+04,zf-RING_2|PF13639.2|9.3e-14,zf-RING_11|PF17123.1|1e-09,zf-rbx1|PF12678.3|5.7e-08,zf-C3HC4|PF00097.21|1.2e-05 R_Transcript_244746:91-1149(+)
MNLSPPPPPLQPPSSLFHLPIHTSSGNSFPVIAIALIGILATAFLLVGYYVFVIKCCLNWHRLNVLSRFSSRRHHSPNDAVSSSEDAPKGLDEAVIRSIPVIKFRKLPEQERGADTINRKNINQTISKSTNTSNTYECAVCLSEFEDDERLRVIPNCCHAFHIDCIDVWLQSNANCPLCRSTISVSSILYNNVDRISLNPPPRPLSPPAPCAGGDNADDDSDYVVIEIQGNNLDHPRFVSEEMFLQDKKKHGKKKLEHVCSMGDEWIDMRKKDEEFKDVVQPIRRSISMDLSVDREFWLEIQQCSSKLVCSEDYSSTPNISGSKVRRSIFSFGHGRRSSRGSNSVQPLHLDP*

Click here to download the sequence:
Link to NCBI Protein BLAST