Transcript Information: R_Transcript_24478.p1


Annotated TAIR IDAT4G37870.1
Annotated Gene Namephosphoenolpyruvate carboxykinase 1
Annotated Gene Symbol(s)PCK1, PEPCK
Annotation TypeOrtholog
Chromosome Positionchr4:17802974-17806332 | Reverse length=671
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1100.98498972981
Replicate 275.694680623356
Replicate 3123.82113983518
Condition 2: 8 Hour
Replicate 171.975848097575
Replicate 2112.92076185458
Replicate 3140.26993502108
Condition 3: 24 Hour
Replicate 157.620275628988
Replicate 231.998476968326
Replicate 364.769062583315


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_24478.p1 GENE.R_Transcript_24478~~R_Transcript_24478.p1 ORF type:complete len:661 (+),score=105.65,PEPCK_ATP|PF01293.16|1.5e-212 R_Transcript_24478:170-2152(+)
ATGGCGGAAAACGGGAACGGGAACGGGAACTTGAGCATGAACGGAAACGGGCTGACGAAGATACAAACGAACGGGAAAAACGGTAAGAACGGGAACGGGATATGTCATGATGACAGTACCCCTCCTGTGAAAGCCCAAACCATCGACGAACTTCATTCCTTACAAAAGAAGAGATCCAACCCCACCACTCCCATCAAAGACGCCCAATTTCCTGGCGCCTTTGCCACCATGTCTGAAGAGGAACGCCAACGCCAGCAGCTCCAATCCATCAGTGCGTCATTGGCGTCATTCGTAAGAGAGACAGGGCCCAAGATTGTGAGAGGAGATCCAAAGAAGGCACAGCCTTCAAAGCACGTGCATCACCACCCTGTTGCTCCTACTATCAGCGTCAGTGATAGCGCCCTCAAGTTCACCCACGTCCTCTACAATCTCTCTCCTGCTGAGTTATATGAGCAGGCAATTAAGTATGAGAAGGGGTCTTTCATCACATCCACGGGTGCACTGGCAACTCTATCTGGGGCCAAGACCGGAAGGTCTCCCAGAGACAAGCGTGTTGTCAAGGATGAGACAACCGAGCATGAGCTTTGGTGGGGCAAAGGCTCACCAAACATCGAGATGGATGAGCATACCTTCATGATTAACAGAGAAAGGGCCGTTGATTATTTAAATTCTTTGGACAAGGTATTTGTGAATGATCAGTTCCTTAACTGGGATCCAGAGAACCGAATTAAAGTCAGGATTGTGTCTGCTAGGGCGTACCATTCCTTGTTCATGCACAACATGTGTATTCGACCTACACCCGAAGAGCTGGAGAATTTCGGTACTCCGGACTTCACTATATACAATGCTGGTCAGTTTCCGTGTAATCGTTATACCCACTACATGACATCATCCACTAGCATAGATATTAATCTTGCTAGGAAGGAAATGGTCATCCTCGGCACCCAGTATGCCGGGGAGATGAAGAAAGGTCTTTTCAGTGTCATGCACTATCTCATGCCTAAGCGCCAAATCCTCTCCCTTCATTCCGGCTGCAATATGGGCAAAGATGGCGATGTGGCCCTCTTCTTTGGCTTGTCAGGAACCGGGAAAACTACACTGTCGACAGATCACAATCGTTACTTGATTGGTGATGATGAACACTGCTGGAGTGATAATGGCGTGTCTAACATTGAAGGCGGATGCTATGCTAAGTGCATTGATCTCTCTGGGGAGAAAGAGCCTGATATCTGGAATGCCATCAAATTCGGAACTGTGCTTGAGAACGTGGTGTTTGATGAGCACACTCGTGAAGTGGATTACTCTGACAAATCCGTTACAGAGAACACTAGAGCATCCTACCCTATTGGGTATATTCCAAATGTGAAGCTACCCTGTGTTGGACCACACCCGAAGAATGTCATTCTTTTGGCTTGCGATGCATTTGGTGTCCTCCCACCCGTGAGCAAGTTGAACTTGGCTCAGACCATGTACCATTTCATCAGCGGCTACACAGCTCTGGTGGCCGGCACAGTAGATGGGATTAAAGAGCCAACGGCAACATTCTCAGCATGCTTTGGTGCGGCTTTCATAATGCTGCACCCTACTAGGTATGCTGCCATGCTTGCTGAAAAGATGCAGAAATATGGTGCTACAGGATGGCTCGTCAACACTGGCTGGTGTGGTGGAAGGTATGGGGTTGGAAGCCGTATCAAGTTGCAATATACTCGTAGGATTGTTGATGCCATACACTCTGGTTCCCTGCTGAGTGCAAGTTACAAGAAGACTGAAGTTTTTGGGCTCGAGATCCCAACTGAGGTCGAGGGTGTGCCTTCAGAAATCCTTGATCCAGTGAATGCTTGGCCTGAGAAGGATGCTTACCAGGAGACCCTGCTCAAGCTAGCAGGGCTGTTCAAAAAGAATTTTGAGGTGTTCACCAACCACAAGATTGGCAAAGACAATCAGCTGACAGAGGAGATTCTTGCTGCTGGTCCTAACTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_24478.p1 GENE.R_Transcript_24478~~R_Transcript_24478.p1 ORF type:complete len:661 (+),score=105.65,PEPCK_ATP|PF01293.16|1.5e-212 R_Transcript_24478:170-2152(+)
MAENGNGNGNLSMNGNGLTKIQTNGKNGKNGNGICHDDSTPPVKAQTIDELHSLQKKRSNPTTPIKDAQFPGAFATMSEEERQRQQLQSISASLASFVRETGPKIVRGDPKKAQPSKHVHHHPVAPTISVSDSALKFTHVLYNLSPAELYEQAIKYEKGSFITSTGALATLSGAKTGRSPRDKRVVKDETTEHELWWGKGSPNIEMDEHTFMINRERAVDYLNSLDKVFVNDQFLNWDPENRIKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVALFFGLSGTGKTTLSTDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSGEKEPDIWNAIKFGTVLENVVFDEHTREVDYSDKSVTENTRASYPIGYIPNVKLPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTVDGIKEPTATFSACFGAAFIMLHPTRYAAMLAEKMQKYGATGWLVNTGWCGGRYGVGSRIKLQYTRRIVDAIHSGSLLSASYKKTEVFGLEIPTEVEGVPSEILDPVNAWPEKDAYQETLLKLAGLFKKNFEVFTNHKIGKDNQLTEEILAAGPNF*

Click here to download the sequence:
Link to NCBI Protein BLAST