Transcript Information: R_Transcript_244793.p1


Annotated TAIR IDAT1G12300.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:4184163-4186076 | Reverse length=637
E-Value2E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.10091073830904
Condition 2: 8 Hour
Replicate 10.21573449292727
Replicate 20
Replicate 30.079963042380559
Condition 3: 24 Hour
Replicate 10.20227142931898
Replicate 20.29147919238648
Replicate 30.48210803275104


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_244793.p1 GENE.R_Transcript_244793~~R_Transcript_244793.p1 ORF type:complete len:227 (+),score=28.12,PPR_2|PF13041.2|2.7e+02,PPR_2|PF13041.2|19,PPR_2|PF13041.2|0.0015,PPR_2|PF13041.2|1.5e-12,PPR_1|PF12854.3|1.6e+03,PPR_1|PF12854.3|6.5e+03,PPR_1|PF12854.3|0.009,PPR_1|PF12854.3|0.019,PPR_1|PF12854.3|1.7e-06,PPR|PF01535.16|9.4e+02,PPR|PF01535.16|4.8e+03,PPR|PF01535.16|0.29,PPR|PF01535.16|0.054,PPR|PF01535.16|0.023,PPR_3|PF13812.2|5e+02,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|3.4,PPR_3|PF13812.2|5.7 R_Transcript_244793:239-919(+)
ATGGCTATGGCTGTCAAAGCTTCTTCATTTTCTCTCCATCTCAGTCAAGGTGAATTCTATCTTCAATGCCTCTTGTTCTCTCCTTTTCGCTTTCAATTTCAATTCAAATATAAATACAATTACTCTACTTCAATACCAAGAAGTAATCACATTGACGCTGACCCTAATTCTAAATGGTTCCTGGAATCAGTGAAACAGCAATCCAAGTTAGGCTTCAAAGACTTTGACCTTCCCTTCTCTCTCTTTAACCAAATGACCTCTTTACGCCCTCTCCCTTCTATCATCGATTTCTGTCAGCTCTTGACTGCCATTGCCAAGATGGATAAAGCCCACCAACCTCACTCTTACTCCACTGTCATCTCTCTTTCTAGGCAACTGGAGTTGTCAGGCCTTCGACCCGATCTTTATTTTCTCTCCATCCTCACCAAATGTTACTGTCAATTGGGTCGTGTTGATCTTGGCTTCTCCCTCCTTGGTAAAGCCCTTAAGCTTGGCTACCCCCCTGATTCTGTACGCTTCACTACCTTACTCAATGGTCTTATCCACTCTGACAACCTCCCTCAGGCTGTTAAGTTATTGGATAAAATTGTCAAGCTTGGCATCCAACCTACCATTGTTACCTATGGCACCATGATCAAAGGCCTCTGTAGAATTGGCGACAATTCTGGTGCTCTCTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_244793.p1 GENE.R_Transcript_244793~~R_Transcript_244793.p1 ORF type:complete len:227 (+),score=28.12,PPR_2|PF13041.2|2.7e+02,PPR_2|PF13041.2|19,PPR_2|PF13041.2|0.0015,PPR_2|PF13041.2|1.5e-12,PPR_1|PF12854.3|1.6e+03,PPR_1|PF12854.3|6.5e+03,PPR_1|PF12854.3|0.009,PPR_1|PF12854.3|0.019,PPR_1|PF12854.3|1.7e-06,PPR|PF01535.16|9.4e+02,PPR|PF01535.16|4.8e+03,PPR|PF01535.16|0.29,PPR|PF01535.16|0.054,PPR|PF01535.16|0.023,PPR_3|PF13812.2|5e+02,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|3.4,PPR_3|PF13812.2|5.7 R_Transcript_244793:239-919(+)
MAMAVKASSFSLHLSQGEFYLQCLLFSPFRFQFQFKYKYNYSTSIPRSNHIDADPNSKWFLESVKQQSKLGFKDFDLPFSLFNQMTSLRPLPSIIDFCQLLTAIAKMDKAHQPHSYSTVISLSRQLELSGLRPDLYFLSILTKCYCQLGRVDLGFSLLGKALKLGYPPDSVRFTTLLNGLIHSDNLPQAVKLLDKIVKLGIQPTIVTYGTMIKGLCRIGDNSGALC*

Click here to download the sequence:
Link to NCBI Protein BLAST