Transcript Information: R_Transcript_244794.p1


Annotated TAIR IDAT1G62680.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:23208247-23209893 | Reverse length=548
E-Value2E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.12621579869714
Replicate 20
Replicate 30.093565003197871
Condition 3: 24 Hour
Replicate 10.11833921251394
Replicate 20
Replicate 30.78976254024887


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_244794.p1 GENE.R_Transcript_244794~~R_Transcript_244794.p1 ORF type:internal len:194 (+),score=27.53,PPR_1|PF12854.3|2.3e+03,PPR_1|PF12854.3|0.036,PPR_1|PF12854.3|0.012,PPR_1|PF12854.3|1.2e-07,PPR_2|PF13041.2|8.1e+02,PPR_2|PF13041.2|11,PPR_2|PF13041.2|7.3,PPR_2|PF13041.2|5.6e-14,PPR|PF01535.16|8.2e+02,PPR|PF01535.16|0.34,PPR|PF01535.16|0.036,PPR|PF01535.16|0.032,PPR_3|PF13812.2|1.7e+03,PPR_3|PF13812.2|4.2e+02,PPR_3|PF13812.2|9,PPR_3|PF13812.2|20,PPR_3|PF13812.2|1.6 R_Transcript_244794:3-581(+)
CCATTTCAATTTCATTCCTGCAAATGCAATTACTCAACTTCACGTAGTAGTTCACGACCTATTGATTTCGCTAAAATTTCCCTCGAGTCTATGCGACAGCAATCCAAGTTAGGGTTTAAAGAATTGGACCTTCCTTTGTCTCTCTTTAACCAAATGACCTCTTTGCGACCTCTCCCTTGTGTTGTTGATTTCAACCAGCTCTTTACCGCCATTGCCAAGATGGAGAAAGCCCACCAACCTCACTCTTACTCCACTGCTGTTTCTCTTTCTGGGCAGCTGGAGTTGTTAGGTGTCCGCCCTGATTTGCATTCCCTTGCCATTCTCGCCCGTTGTTACTGTCAATTGGGTCGCGTTGATCTTGGCTTCTCCCTCCTTGGTAAAACCCTTAAGCTTGGCTATCCCCCTGATTCTGTAATCCTCAATACTTTACTCAATGGCCTCATTCACTCTCACAAGCTTCCCCATGCTGTTAAGTTGTTGGATAAAATTGTCAAGCTTGGTATCCAACCTGACATTGTTACCTACGGCACTATGATCAAAGGCCTTTGTAGAATTGGCGACAATGCTGGTGCTCTCCGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_244794.p1 GENE.R_Transcript_244794~~R_Transcript_244794.p1 ORF type:internal len:194 (+),score=27.53,PPR_1|PF12854.3|2.3e+03,PPR_1|PF12854.3|0.036,PPR_1|PF12854.3|0.012,PPR_1|PF12854.3|1.2e-07,PPR_2|PF13041.2|8.1e+02,PPR_2|PF13041.2|11,PPR_2|PF13041.2|7.3,PPR_2|PF13041.2|5.6e-14,PPR|PF01535.16|8.2e+02,PPR|PF01535.16|0.34,PPR|PF01535.16|0.036,PPR|PF01535.16|0.032,PPR_3|PF13812.2|1.7e+03,PPR_3|PF13812.2|4.2e+02,PPR_3|PF13812.2|9,PPR_3|PF13812.2|20,PPR_3|PF13812.2|1.6 R_Transcript_244794:3-581(+)
PFQFHSCKCNYSTSRSSSRPIDFAKISLESMRQQSKLGFKELDLPLSLFNQMTSLRPLPCVVDFNQLFTAIAKMEKAHQPHSYSTAVSLSGQLELLGVRPDLHSLAILARCYCQLGRVDLGFSLLGKTLKLGYPPDSVILNTLLNGLIHSHKLPHAVKLLDKIVKLGIQPDIVTYGTMIKGLCRIGDNAGALR

Click here to download the sequence:
Link to NCBI Protein BLAST