Transcript Information: R_Transcript_244795.p1


Annotated TAIR IDAT1G12700.1
Annotated Gene NameATP binding;nucleic acid binding;helicases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:4323722-4326227 | Reverse length=735
E-Value8E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.30320533147373
Replicate 20.13951030176942
Replicate 30.30440847303857
Condition 2: 8 Hour
Replicate 10.32539355411622
Replicate 20.4457318639439
Replicate 30.6633478964261
Condition 3: 24 Hour
Replicate 10.68644606328683
Replicate 20.14654657070151
Replicate 30.50901638806738


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_244795.p1 GENE.R_Transcript_244795~~R_Transcript_244795.p1 ORF type:3prime_partial len:301 (+),score=41.38,PPR_1|PF12854.3|3.8e+03,PPR_1|PF12854.3|0.014,PPR_1|PF12854.3|0.0076,PPR_1|PF12854.3|1.1e-09,PPR_1|PF12854.3|6.9e-10,PPR_1|PF12854.3|0.00016,PPR_2|PF13041.2|1.4e+03,PPR_2|PF13041.2|2.2,PPR_2|PF13041.2|1.7e-13,PPR_2|PF13041.2|4.6e-07,PPR_2|PF13041.2|1.3e-14,PPR|PF01535.16|1.2e+03,PPR|PF01535.16|0.1,PPR|PF01535.16|0.069,PPR|PF01535.16|0.00033,PPR|PF01535.16|1.5e-05,PPR|PF01535.16|0.092,PPR_3|PF13812.2|2.4e+03,PPR_3|PF13812.2|6.3e+02,PPR_3|PF13812.2|24,PPR_3|PF13812.2|2.7,PPR_3|PF13812.2|0.0053,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|0.23 R_Transcript_244795:183-1082(+)
ATGGCTATGGCTGTCAAAGCTTCATCATCTTCCCTCCATCTCCATGTCGGTAAATTCTATCCCCAATACCTCTTCTTCTCTCCATTTCACTTTCAATTTCTGTTTTACCCATATACATTTGCTAAATGTTACTCCACTTCTATTCCAAGAAATTACATTCACGCTCACCCTCTATCGTTCCTGGAATCAGTGAAGCAGCAATCCAAATTAGGGTTTAAAGACTTGGACCTGCCTTTGTCTCTCTTTAACCAAATGACCTCTTTGCGACCTCTCCCTTGTGTTGTTGATTTCAACCAGCTCTTTACCGCCATTGCCAAGATGGAGAAAGCCCACCAACCTCACTCTTACTCCAGTGCCATCTCTCTTTCTAGGCAACTGGAGTTGTCAGGCCTTCGACCCGATCTTTATTTTCTCTCCATCCTCACCAAATGTTACTGTCAATTGGGTCGTGTTGATTTGAGCTTCTCTCTTTTGGGTAAGATCCTGAAGCTTGGCTACCCCCCTGATACTGTACTCTTCACTACCTTACTCAATGGTCTTATCCACTCTGACAACCTCCCTCAGGCTGTTAACTTGTTGGATAAAATTGTCAAGCTTGGTATCCAACCTGACATTGTTACCTACGGCACTATGATCAAAGGCCTTTGTAGAATTGGCGACAATGCTGGTGCTCTCCGCTTGCTCGGGAACATGGACCGTTCTGCCCTTTGTAAGCCCGACCTTGTCATTTACAGCACTATTATTGACAGTTTTTGTAAAGACAGGCTGTTGAATGAGGCCTTAAAGCTCTCCTCCGAGATGAAGGGCAAGGGCATTTCACGTGATGTCTACACTTACACCTCTTTGGTTCGAGGATTCTTTAATTTGGGCCTCAGAGAAGAAGCCATGGCCTTGTTGGCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_244795.p1 GENE.R_Transcript_244795~~R_Transcript_244795.p1 ORF type:3prime_partial len:301 (+),score=41.38,PPR_1|PF12854.3|3.8e+03,PPR_1|PF12854.3|0.014,PPR_1|PF12854.3|0.0076,PPR_1|PF12854.3|1.1e-09,PPR_1|PF12854.3|6.9e-10,PPR_1|PF12854.3|0.00016,PPR_2|PF13041.2|1.4e+03,PPR_2|PF13041.2|2.2,PPR_2|PF13041.2|1.7e-13,PPR_2|PF13041.2|4.6e-07,PPR_2|PF13041.2|1.3e-14,PPR|PF01535.16|1.2e+03,PPR|PF01535.16|0.1,PPR|PF01535.16|0.069,PPR|PF01535.16|0.00033,PPR|PF01535.16|1.5e-05,PPR|PF01535.16|0.092,PPR_3|PF13812.2|2.4e+03,PPR_3|PF13812.2|6.3e+02,PPR_3|PF13812.2|24,PPR_3|PF13812.2|2.7,PPR_3|PF13812.2|0.0053,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|0.23 R_Transcript_244795:183-1082(+)
MAMAVKASSSSLHLHVGKFYPQYLFFSPFHFQFLFYPYTFAKCYSTSIPRNYIHAHPLSFLESVKQQSKLGFKDLDLPLSLFNQMTSLRPLPCVVDFNQLFTAIAKMEKAHQPHSYSSAISLSRQLELSGLRPDLYFLSILTKCYCQLGRVDLSFSLLGKILKLGYPPDTVLFTTLLNGLIHSDNLPQAVNLLDKIVKLGIQPDIVTYGTMIKGLCRIGDNAGALRLLGNMDRSALCKPDLVIYSTIIDSFCKDRLLNEALKLSSEMKGKGISRDVYTYTSLVRGFFNLGLREEAMALLA

Click here to download the sequence:
Link to NCBI Protein BLAST