Transcript Information: R_Transcript_244963.p1


Annotated TAIR IDAT5G45820.1
Annotated Gene NameCBL-interacting protein kinase 20
Annotated Gene Symbol(s)CIPK20, SnRK3.6, PKS18
Annotation TypeOrtholog
Chromosome Positionchr5:18587081-18588400 | Reverse length=439
E-Value4E-211
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2670168124751
Replicate 20.72872192334223
Replicate 30.69564929793088
Condition 2: 8 Hour
Replicate 10.21245869802382
Replicate 20.1940206667348
Replicate 30.078748853016863
Condition 3: 24 Hour
Replicate 10.19920006271327
Replicate 20.33489547122352
Replicate 30.42730876829084


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_244963.p1 GENE.R_Transcript_244963~~R_Transcript_244963.p1 ORF type:complete len:461 (+),score=44.06,Pkinase|PF00069.21|4.3e-74,Pkinase_Tyr|PF07714.13|3.7e-41,NAF|PF03822.10|2.7e-22,Kinase-like|PF14531.2|1.2e+03,Kinase-like|PF14531.2|2.2e-08 R_Transcript_244963:499-1881(+)
ATGGAGAAGAATGGGTCGATTTTAATGCAAAAATACGAGCTAGGCCGGTTGCTAGGACAAGGTACATTTGCCAAGGTCTATTATGCAAGACACATTGTGTCGGGCCAAAGCGTGGCCATCAAGATGGTCGACAAGGAGAAGGTATTGCGGGTTGGATTAATAAACCAAATCAAGCGTGAAATCTCGGTGATGAGATTAGTTAGACACCCTAACATAGTCCAACTTTATGAAGTCATGGCTAGCAAGACCAAGATATATTTTGCAATGGAATATGTTAAGGGTGGTGAGCTATTTAATAAGATCACCAAGGGAAGGCTTAAGGAAGATGAAGCACGTAAGTACTTTCAACAACTAATAAGTGCCATTGATTTTTGTCATAGCCGTGGTGTTTACCATAGAGATCTTAAGCCGGAGAATTTACTCCTTGATGAGAATGGTAACCTCAAAGTCTCGGATTTTGGGCTTAGCGCTTTGTTGGATTCACGACGCCAAGATGGGCTTCTCCATACTACTTGTGGCACCCCGGCCTATGTTGCTCCCGAGGTCATTAACAAGAGAGGTTATGATGGCTCCAAAGCGGATATTTGGTCTTGTGGGGTGGTGTTGTATGTGCTATTGGCTGGGTTTCTACCATTTCATGACACAAACCTAATGGAGTTGTATAGAAAGATTAGCAAGGGGGATTTCAGATGCCCAGGCTTCTTCCCACCGGAGGTTCGAAAACTTTTAGCCCGAATCCTTGACCCGAACCCATATACTAGGATAACCGTGTCGAAGTTGATGGAGAACTCATGGTTTCAAAAAGGATTCAAACATGTGGAAAGTAGGCCCAATGACGTAGACGATATAGGCCCGCCCACAACCCCAAGAGATGTCCGGGCTGCCTTCACAATCGATTTCAAAAGTGGGTCATCCGAGCCAACAGCCAAAGAGGATGATCAAAAGGAAACAAACACAGGCCCAGTGAAGCCCACATGTTTGAATGCCTTTGACATAATCTCCCTCTCACCGGGCTTCGATCTATCGGGCCTATTCGAGAAGGACCCAAGACATAGGCCCGAGGCCCGGTTCACGACATGGAAGCCCCCATCAATGATAGTATCAAAGTTAGAGCAAATAGCCCAAATGGATGGATTCAAAATACAGAAGAAGGATGGGATGGTGAAGATGCAGAGCAGCAAAGTAGGGAGGAAAGGGCTACTAAGAATCAACGCCGAGATCTTCGAGGTGGCCCCCACATTACACATGGTGGAGGTCAAGAAGTCGTCCGGCGACACCATAGAGTATAATGATTTTTGTGACCATGATTTGAAGCCGGCTCTAAGGGACATAGTTTGGACATGGCAAGGAAGTGCACCACAACAGCAAGAACAGACTGTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_244963.p1 GENE.R_Transcript_244963~~R_Transcript_244963.p1 ORF type:complete len:461 (+),score=44.06,Pkinase|PF00069.21|4.3e-74,Pkinase_Tyr|PF07714.13|3.7e-41,NAF|PF03822.10|2.7e-22,Kinase-like|PF14531.2|1.2e+03,Kinase-like|PF14531.2|2.2e-08 R_Transcript_244963:499-1881(+)
MEKNGSILMQKYELGRLLGQGTFAKVYYARHIVSGQSVAIKMVDKEKVLRVGLINQIKREISVMRLVRHPNIVQLYEVMASKTKIYFAMEYVKGGELFNKITKGRLKEDEARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGNLKVSDFGLSALLDSRRQDGLLHTTCGTPAYVAPEVINKRGYDGSKADIWSCGVVLYVLLAGFLPFHDTNLMELYRKISKGDFRCPGFFPPEVRKLLARILDPNPYTRITVSKLMENSWFQKGFKHVESRPNDVDDIGPPTTPRDVRAAFTIDFKSGSSEPTAKEDDQKETNTGPVKPTCLNAFDIISLSPGFDLSGLFEKDPRHRPEARFTTWKPPSMIVSKLEQIAQMDGFKIQKKDGMVKMQSSKVGRKGLLRINAEIFEVAPTLHMVEVKKSSGDTIEYNDFCDHDLKPALRDIVWTWQGSAPQQQEQTV*

Click here to download the sequence:
Link to NCBI Protein BLAST