Transcript Information: R_Transcript_245161.p1


Annotated TAIR IDAT1G68890.1
Annotated Gene Namemagnesium ion binding;thiamin pyrophosphate binding;hydro-lyases;catalytics;2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:25896988-25906553 | Forward length=1715
E-Value5E-50
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9483497648295
Replicate 20.70774046347072
Replicate 31.6729639817415
Condition 2: 8 Hour
Replicate 10.8253662341768
Replicate 20.56530319261424
Replicate 30.91777806507575
Condition 3: 24 Hour
Replicate 11.9346466764919
Replicate 20.55757676970561
Replicate 31.5370579134057


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_245161.p1 GENE.R_Transcript_245161~~R_Transcript_245161.p1 ORF type:complete len:356 (+),score=58.22 R_Transcript_245161:148-1215(+)
ATGGATATTCATACAATTTACCCAAAATTCCATTCCTTTTCATCTCACATTTCCAAGTTTCAAGTCACCGCTTTTCTTCCCTACAAACCTAAACCCATTAGCCATGCATCTCCTAAACCATCTTTTCTTCCCTACAAACCTAAACCCATTAGCCATGCATCTCCTAAACCATCTTTTCTTCATAATTTCCATTTTTTGAGTTCTTTTTCCTTATACCCAAATCCCATTTTCAAGGTGGAGGTGAATAAGGCAATGAAAATGGATAATTTGGTTGAGATGTCGAAGGACAAATTTGGTGATTTGCTGGTAGAGGCCTGCCTTACTCGGACTCTTCCGCCTGCGTTGACATTGGAACATGGGCTTGAAGCACTTAAACATGCTGTTGAAGAACTGAAGCTCAATCCTCCTAATTGTACTAGTGGGATGATTAGATTTCAGGTTGCTGTGCCCCCTAGCGCAAATGCATTGAACTGGTTTTGTTCTCAACCCGCATCGTCAGGAGTGTTTCCTCAGTTTTATGTTTCCAAGAAAGTAGAGAGCCCAGCTTGCGAGGCAGCTTTGACAAGTAAAAAATGTGGAATTTTTGGTCTTGGAGTTGCTGTTGACTTCAAGCAGGCTTCTAGTAGCCCTGGGGGATGGAACTCATTTAGAAGATATCTCTTGGTTGATTCATTCAACATTACAACTTATGGTTTCATTGGTATCAATTATGACGTGCGCTCATCTTTTATGAAGCATGAGACTGGTTCATTTTACTTTGTAATTCCCCAGATTGAACTGAATGAATATGAAGGCTTCTGCTTGTTGGCTGGAACTTTTGTATGGGATGACTCTTCCCTAAGTAACTTTGAGCAAGCTCTTCATTCTTATGAGATATCTCTCGTCCAGGCAAGCAATCACATGCCCCCTGCACTGGAGAACTGCTATATAAACTTAAAAGAGCATGTCATTCGTAACTTCAATATGGCCAAGCAGTCAAAGTTGGAAATGATTTATATGGAAGCCCCATTACTAGGAGATTGTGATAGTGCTGCGGCTTCTAAGGAAATGGTATCTCCTTTTTCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_245161.p1 GENE.R_Transcript_245161~~R_Transcript_245161.p1 ORF type:complete len:356 (+),score=58.22 R_Transcript_245161:148-1215(+)
MDIHTIYPKFHSFSSHISKFQVTAFLPYKPKPISHASPKPSFLPYKPKPISHASPKPSFLHNFHFLSSFSLYPNPIFKVEVNKAMKMDNLVEMSKDKFGDLLVEACLTRTLPPALTLEHGLEALKHAVEELKLNPPNCTSGMIRFQVAVPPSANALNWFCSQPASSGVFPQFYVSKKVESPACEAALTSKKCGIFGLGVAVDFKQASSSPGGWNSFRRYLLVDSFNITTYGFIGINYDVRSSFMKHETGSFYFVIPQIELNEYEGFCLLAGTFVWDDSSLSNFEQALHSYEISLVQASNHMPPALENCYINLKEHVIRNFNMAKQSKLEMIYMEAPLLGDCDSAAASKEMVSPFS*

Click here to download the sequence:
Link to NCBI Protein BLAST