Transcript Information: R_Transcript_245388.p1


Annotated TAIR IDAT1G20696.2
Annotated Gene Namehigh mobility group B3
Annotated Gene Symbol(s)HMGB3, NFD3, NFD03
Annotation TypeOrtholog
Chromosome Positionchr1:7179825-7181193 | Forward length=147
E-Value3.8E-48
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.0407318144034
Replicate 25.4494214820926
Replicate 36.6447025088076
Condition 2: 8 Hour
Replicate 16.7289399855025
Replicate 25.6328938989246
Replicate 37.7594671354326
Condition 3: 24 Hour
Replicate 14.731761795023
Replicate 25.219183401587
Replicate 37.1845137521877


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_245388.p1 GENE.R_Transcript_245388~~R_Transcript_245388.p1 ORF type:3prime_partial len:131 (-),score=46.44,HMG_box|PF00505.15|7.6e-23,HMG_box_2|PF09011.6|5.2e-16 R_Transcript_245388:1-390(-)
ATGAAGGGAGGAAAATCCAAGGCCGAGCCTAAGCGCTCCGAGAGCAAGCTGTCTGTGAAGAAAGGAGCAGCGGCTAAGAAAGGAAAGCCTGCTAAGGATCCTAACAAGCCTAAGAGGCCTCCTAGCGCCTTCTTCGTCTTCATGGAAGATTTCAGGAAGACTTTCAAGGAGAAGCATCCTAACAACAAATCAGTTGCCGCTGTCGGAAAAGCTGGTGGCGAGAAATGGAAGTCGTTGACCGAAGTTGAGAAAGCTTCTTACATTGAAAAGGCAGATAAGAAGAAGAAAGAGTACGAGAAAAACATGAATGCTTACTACAAGAAACAGGCTGAGGGACCTGGAGATGATGATTCTGACAAGTCCAGATCTGAGGTCAATGATGAGGAAGGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_245388.p1 GENE.R_Transcript_245388~~R_Transcript_245388.p1 ORF type:3prime_partial len:131 (-),score=46.44,HMG_box|PF00505.15|7.6e-23,HMG_box_2|PF09011.6|5.2e-16 R_Transcript_245388:1-390(-)
MKGGKSKAEPKRSESKLSVKKGAAAKKGKPAKDPNKPKRPPSAFFVFMEDFRKTFKEKHPNNKSVAAVGKAGGEKWKSLTEVEKASYIEKADKKKKEYEKNMNAYYKKQAEGPGDDDSDKSRSEVNDEEG

Click here to download the sequence:
Link to NCBI Protein BLAST