Transcript Information: R_Transcript_245516.p1


Annotated TAIR IDAT3G21000.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7363921-7365138 | Forward length=405
E-Value3E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.077678737544
Replicate 28.5699185372645
Replicate 38.4147199332805
Condition 2: 8 Hour
Replicate 16.3296793741178
Replicate 29.5832350747938
Replicate 36.5444582508878
Condition 3: 24 Hour
Replicate 17.6526024092347
Replicate 28.2519676121208
Replicate 310.42271651757


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_245516.p1 GENE.R_Transcript_245516~~R_Transcript_245516.p1 ORF type:5prime_partial len:147 (+),score=28.05 R_Transcript_245516:1-441(+)
AAGAAGGCAAAGGAGCAGTCCAATGTAGCCGAGGCTCCAAAAGAGACTGCTAAGGTGTTCGCTGCTGTGGCAACCATGTGCAACGTGGTTGAGGATCCGAAGAGGTGGATCATGGACTGTGGAGCTACGAAGCATTTCTGCTCCAACCGAGACCTGTTTGCTGATTTCACACCATCAACTGGCAAAGAGAAGGTGTACATGGGCAACAAGTCAGAATCCGAGATTCTGGGCAAAGGGACGGTAAACCTGAAACTGTCTTCTGGTAACATTCTTAAACTGCAAAATGTTTTATACGTACCTTCCATGAATAAGAATTTGATTTCTAGCTTAGCTTTAGATAGGGCTGGAATTGAAACTCGTATTAAGAATCAGAAAGTTATTCTGATTCGCAATGGGAATTTGTTGGGAATGGCTATGTACAGAATGACTTGTACACCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_245516.p1 GENE.R_Transcript_245516~~R_Transcript_245516.p1 ORF type:5prime_partial len:147 (+),score=28.05 R_Transcript_245516:1-441(+)
KKAKEQSNVAEAPKETAKVFAAVATMCNVVEDPKRWIMDCGATKHFCSNRDLFADFTPSTGKEKVYMGNKSESEILGKGTVNLKLSSGNILKLQNVLYVPSMNKNLISSLALDRAGIETRIKNQKVILIRNGNLLGMAMYRMTCTP*

Click here to download the sequence:
Link to NCBI Protein BLAST