Transcript Information: R_Transcript_245517.p1


Annotated TAIR IDAT3G21000.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7363921-7365138 | Forward length=405
E-Value4E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.11707267979678
Replicate 30
Condition 3: 24 Hour
Replicate 10.36059383080163
Replicate 20.11547255963653
Replicate 30.34378593749053


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_245517.p1 GENE.R_Transcript_245517~~R_Transcript_245517.p1 ORF type:internal len:191 (-),score=39.50 R_Transcript_245517:3-572(-)
GGGAAGTTCAAGAACCATGGCAAGATCCAGAAGAAGAAAGGATCGAACAACATGATGTGCTACACCTGCGGGAAGCCTGGCCACAAATCCTACCAATGTGATCAGCGGGCTGACAAGAAGGCAAAGGAGCAGTCCAATGTAGCCGAGGCTCCAAAAGAGACTACAAAGGTGTTCGCTGCTGTGGCAACCATGTGTAACGTGGTTGAGGATCCGAAGAGGTGGATCGTGGACTGTGGAGCTACAAAGCATTTTTGCTCCAACCGGGACCTGTTTGCTGATTTTGAAGCTGCCTCGGGACACGAGAAGGTGTACATGGGCAACAAATCAGAATCAGAGATTCTTGGAAAAGGGACGGTAAACCTGAAACTGTCTTCTGGTAACATTCTTAAATTACAGAATGTGTTGTATGTCCCTGCTATGAGTAAAAATTTAATTTCCAGTCTAGCTTTAGATAGGGCTGGAATTGAGACTCGTATTAAGAATCAGAAGGTTATTCTGATTCGCAATGATGAATTTGTAGGGAAAGGTTATGTTCAGGGTGATCTGTACACCCTGGAGGCTGAGGCCATA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_245517.p1 GENE.R_Transcript_245517~~R_Transcript_245517.p1 ORF type:internal len:191 (-),score=39.50 R_Transcript_245517:3-572(-)
GKFKNHGKIQKKKGSNNMMCYTCGKPGHKSYQCDQRADKKAKEQSNVAEAPKETTKVFAAVATMCNVVEDPKRWIVDCGATKHFCSNRDLFADFEAASGHEKVYMGNKSESEILGKGTVNLKLSSGNILKLQNVLYVPAMSKNLISSLALDRAGIETRIKNQKVILIRNDEFVGKGYVQGDLYTLEAEAI

Click here to download the sequence:
Link to NCBI Protein BLAST