Transcript Information: R_Transcript_245732.p1


Annotated TAIR IDAT5G20950.1
Annotated Gene NameGlycosyl hydrolase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:7107609-7110775 | Reverse length=624
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 133.919116933371
Replicate 233.500466587788
Replicate 338.372433043236
Condition 2: 8 Hour
Replicate 124.91475748613
Replicate 227.915495801735
Replicate 331.62079939284
Condition 3: 24 Hour
Replicate 137.653728414865
Replicate 239.299099838465
Replicate 332.866410063287


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_245732.p1 GENE.R_Transcript_245732~~R_Transcript_245732.p1 ORF type:complete len:628 (+),score=109.14,Glyco_hydro_3|PF00933.17|4.7e-69,Glyco_hydro_3_C|PF01915.18|9.3e-37 R_Transcript_245732:115-1998(+)
ATGGCAAAAATTCCCATGTTATGGGTGGCAATATTATTAGTTTCAAGCTGTTACTATACATCAATAGCAAATGCAGAATATCTCAAGTACAAAGATCCTAAGAAACCATTGAATGTTAGGATTAGGGACTTGATGAACAGGATGACTCTTGAGGAAAAGATTGGCCAGATGACTCAGATTGAAAGGAGTGTTGCCTCTGCTGATGTCATGAACAAGTATTTCATCGGGAGTGTGTTAAGTGGAGGAGGAAGTGTACCAGCTGAGAAAGCCTCTGCTGAGACATGGATCAACATGGTAAATGAGTTTCAAAAGGGGGCGCTATCAACCCGTCTTGGGATTCCTATGATTTATGGGATTGATGCTGTTCATGGTCATAATAATGTTTACAAAGCTACTATTTTCCCTCACAATGTGGGTTTGGGAGCAACTAGGGACCCTGAACTTGTTAAGAAGATCGGAGCTGCGACCGCCCTAGAAGTCAGGGCTACTGGCATTCCTTACACTTTTGCACCATGCATCGCCGTTTGTAGAGATCCAAGATGGGGAAGGTGTTATGAAAGTTATAGTGAAGACCCTAAAATTGTGCAAGAAATGACTCAAATTATTCCAGGCTTACAGGGTGACCCTCCCAAGAAGGGTGTCCCCTTCGTTGCAGGAACGAGAAATGTTGCTGCTTGTGCTAAGCACTATGTAGGAGATGGTGGCACAACCAAGGGGATCAATGAGAACAACACAGTTATAGACTTTCATGGGTTGCTCAGCATTCACATGCCAGGCTACTATAACGCGATCATCAATGGCGTGTCCACTGTCATGGTCTCTTACTCGAGCATCAATGGCATTAAGATGCATGCTAACTACAATCTCATTACTGGTTTCCTTAAGAACACATTGAAATTCAGGGGATTTGTCATCACAGACTGGCAAGGCCTTGACAGGATTACCTCACCACCTGGTGCTAACTATTCATATTCTGTTCAAGCTGGGGTTCATGCTGGTGTTGACATGGTCATGGTTCCTTACAACTATACTGATTTCATTGATGACTTGACCTTCCAAGTTAAGAACAATATCATCCCTATGAGCAGAATTGATGATGCCGTCAGAAGGATTTTACGCGTTAAATTTCAGATGGGTCTATTTGAACATCCTTTAGCTGATACCAGTCTAGTTCACGAGCTCGGAAAACAGGAGCATAGAGAAATAGCAAGAGAAGCTGTGAGGAAATCACTGGTACTGTTGAAGAATGGGAAAGCTGGTGATAAGCCAGTGCTGCCCCTTTCTAAGAAAGCACCTAAGATACTTGTGGCTGGAAGCCATGCTGACAACCTGGGTTATCAGTGTGGTGGATGGACAATTCAATGGCAAGGACTTAGTGGAAACAACCTCACTGAAGGAACCACAATCCTAACAGCAATTAAGAACACAGTGGACCCAAAGACACAAGTAGTGTACCAAGAGAACCCTGATGCTGAATATGTCAAGTCAAACAAGTTCTCCTATGCCATTGTAGTAGTGGGTGAGCACCCATATGCTGAGACCTTTGGTGACAGCCTCAACTTAACCATGAGTGACCCAGGCTACAGCACCATAACGAACGTGTGTGGGGCCGTCAAGTGTGTCGTGGTCGTTGTCTCAGGCCGGCCTGTGGTGATCGAGCCCTACGTGACTCGTATGGATGCCCTAGTAGCTGCTTGGCTACCAGGAACTGAAGGTCAGGGTGTTGCTGATGTTCTGTTTGGTGACTACGGGTTCACTGGCAAACTCTCTAGAACTTGGTTCAAGACTGTTGATCAGCTCCCTATGAATGTTGGTGATCCACATTATGACCCAATTTTCCCATTCGGGTTCGGACTTACTACACAGCCTACCAAAGGCTACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_245732.p1 GENE.R_Transcript_245732~~R_Transcript_245732.p1 ORF type:complete len:628 (+),score=109.14,Glyco_hydro_3|PF00933.17|4.7e-69,Glyco_hydro_3_C|PF01915.18|9.3e-37 R_Transcript_245732:115-1998(+)
MAKIPMLWVAILLVSSCYYTSIANAEYLKYKDPKKPLNVRIRDLMNRMTLEEKIGQMTQIERSVASADVMNKYFIGSVLSGGGSVPAEKASAETWINMVNEFQKGALSTRLGIPMIYGIDAVHGHNNVYKATIFPHNVGLGATRDPELVKKIGAATALEVRATGIPYTFAPCIAVCRDPRWGRCYESYSEDPKIVQEMTQIIPGLQGDPPKKGVPFVAGTRNVAACAKHYVGDGGTTKGINENNTVIDFHGLLSIHMPGYYNAIINGVSTVMVSYSSINGIKMHANYNLITGFLKNTLKFRGFVITDWQGLDRITSPPGANYSYSVQAGVHAGVDMVMVPYNYTDFIDDLTFQVKNNIIPMSRIDDAVRRILRVKFQMGLFEHPLADTSLVHELGKQEHREIAREAVRKSLVLLKNGKAGDKPVLPLSKKAPKILVAGSHADNLGYQCGGWTIQWQGLSGNNLTEGTTILTAIKNTVDPKTQVVYQENPDAEYVKSNKFSYAIVVVGEHPYAETFGDSLNLTMSDPGYSTITNVCGAVKCVVVVVSGRPVVIEPYVTRMDALVAAWLPGTEGQGVADVLFGDYGFTGKLSRTWFKTVDQLPMNVGDPHYDPIFPFGFGLTTQPTKGY*

Click here to download the sequence:
Link to NCBI Protein BLAST