Transcript Information: R_Transcript_24597.p1


Annotated TAIR IDAT5G21940.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:7249446-7250353 | Reverse length=264
E-Value4.8E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 138.466425123092
Replicate 233.127496212381
Replicate 340.638249290952
Condition 2: 8 Hour
Replicate 129.927168268855
Replicate 243.148220145399
Replicate 338.857892365125
Condition 3: 24 Hour
Replicate 128.909831323775
Replicate 219.359616137285
Replicate 327.400163645079


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_24597.p1 GENE.R_Transcript_24597~~R_Transcript_24597.p1 ORF type:complete len:270 (+),score=58.02 R_Transcript_24597:337-1146(+)
ATGATGTCAATAGCTTTGGAAAACAATAGTAATCAAGTTTCTGGAGGTGGGTTTATGAGAACAAGTAGAATGACATCTTGTGGTGGTAATAATAATAATAGGGCTATGGTTGGGAGGGTTGTTGTTGACGATGATGAGAAACAAAATGGTGGGTCAGTTTGGAATCATCCATGCAGTTCATCTTCTTCTTCTATTGGCAAAAATAGTGATGATGAAGATTTTGGTGGTTTTGTTGATCAACAACAAGGAGATGAAGATGAGGTTCAGAGCACTTTTAATTCTGCTGTTGATGCTTTAGAACAAGCTTTGCCCATTAGGCGAGGAATATCCAAGTTCTACAATGGCAAATCAAAGTCCTTTGCAAGTCTAGCTGATGCTGCGTGCTCGTCCATCAAGGACATTACAAAGCCAGAGAATGCTTACAGTCGCAAACGCAAAAACCTACTTGCATATAGTCTTCTCTACGACAAGGGTCGCTCCTCGCTGCTCAAAAGTTCTGGGATCGGAGGTGGCATTGCCAAACGACCAATCCACTCTAGCCGTAGCACATTAGCCCTGGCTGTTGCTATGAACAATTCCGAGAATTCTATCGATGAAAATGGATCTAGCACTGAGACAAATTCAAGTAACCACTCAAGGACTTCCTCGATATCTCTTCCATCATCGCCCCTTTCTCCCTCGCCATGGAGATCGTTCTCATTTGTTGATTTGCAACATTGTGCAGTGAATTCTAGTGCTATCAACTCTAACTTGTCCTCCCCCTTGACGGGAAAGAGGAGCAAACCTGATGAAGTATTTCTTAACCTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_24597.p1 GENE.R_Transcript_24597~~R_Transcript_24597.p1 ORF type:complete len:270 (+),score=58.02 R_Transcript_24597:337-1146(+)
MMSIALENNSNQVSGGGFMRTSRMTSCGGNNNNRAMVGRVVVDDDEKQNGGSVWNHPCSSSSSSIGKNSDDEDFGGFVDQQQGDEDEVQSTFNSAVDALEQALPIRRGISKFYNGKSKSFASLADAACSSIKDITKPENAYSRKRKNLLAYSLLYDKGRSSLLKSSGIGGGIAKRPIHSSRSTLALAVAMNNSENSIDENGSSTETNSSNHSRTSSISLPSSPLSPSPWRSFSFVDLQHCAVNSSAINSNLSSPLTGKRSKPDEVFLNL*

Click here to download the sequence:
Link to NCBI Protein BLAST