Transcript Information: R_Transcript_246410.p4


Annotated TAIR IDAT1G60720.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:22357072-22357941 | Forward length=289
E-Value2E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3465299064956
Replicate 21.8931090539285
Replicate 31.6898412980768
Condition 2: 8 Hour
Replicate 10.40140762208599
Replicate 21.0997155003862
Replicate 30.74391846804865
Condition 3: 24 Hour
Replicate 10.8468043649563
Replicate 21.2654656740495
Replicate 30.89703707733186


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_246410.p4 GENE.R_Transcript_246410~~R_Transcript_246410.p4 ORF type:complete len:244 (+),score=29.54,zf-RVT|PF13966.2|5.3e-16,zf-RVT|PF13966.2|4.4e+03 R_Transcript_246410:5726-6457(+)
ATGCTGGTGAGGCAGGTCTACAAATTGATGTCTCATGATGAGAGTTTGTGGTGCAGTGGGATTAAAGACATTTATCTCAAGGATCGAGATTTTCACAGTTTTCAGCCAACAAAGGAATCATCCCATTTTCTCAAGAGTTTGTGCAAGTTAAGAAATGAATTGTTAGTTGCAACTTCTTCTCAGCAATTGGATTTGCCTCAACATGTGGAATCACAGGGGTTTTTTTCAGCCAAGAAAGCTTATGATATAATTAGAAGGAAAGCACCAAAATGGAGAGATTTCCGAGTGGTATGGGCAGGAGATTTAACAGCCAGACACGCTTTCATGTTGTGGCTTGCCACTAGGAACAAATCGATGACCAGGGATAGAATTGAGCAGGAAAATCCCATTTGTCCCCTCTGCTCCCTGGAACCTGAATCAAATTCACACTTACTGTTCAGGTGTCCATTCTCCAAAAGGGTGTGCAGGGGGGTGCTCCGTTGGGTTAAGTACCCTAGACAGCCTAATAGCTTGCTGAGCATCATCAGAGAAATTCGAAAGAACAGAAGGTTTCCGGTCAAGACTCGTAAAGTTTGGAAAATAGCCTTGGCTGCTATGGTTTATCATATATGGATAGCACGGAACAAGTTGATTTTTGAGAATATTCATGTTACTCCTGAAGCAATTATTCGCCAGGTACAAGTGTTCACTGTGGGACATTGTGTTAGAATCCAAGGTGACTTTGTACTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_246410.p4 GENE.R_Transcript_246410~~R_Transcript_246410.p4 ORF type:complete len:244 (+),score=29.54,zf-RVT|PF13966.2|5.3e-16,zf-RVT|PF13966.2|4.4e+03 R_Transcript_246410:5726-6457(+)
MLVRQVYKLMSHDESLWCSGIKDIYLKDRDFHSFQPTKESSHFLKSLCKLRNELLVATSSQQLDLPQHVESQGFFSAKKAYDIIRRKAPKWRDFRVVWAGDLTARHAFMLWLATRNKSMTRDRIEQENPICPLCSLEPESNSHLLFRCPFSKRVCRGVLRWVKYPRQPNSLLSIIREIRKNRRFPVKTRKVWKIALAAMVYHIWIARNKLIFENIHVTPEAIIRQVQVFTVGHCVRIQGDFVL*

Click here to download the sequence:
Link to NCBI Protein BLAST