Transcript Information: R_Transcript_246604.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value5.1E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2870677596276
Replicate 21.2113250240172
Replicate 30.58735224605519
Condition 2: 8 Hour
Replicate 10.78480336369376
Replicate 21.4333898616145
Replicate 30.8144953483507
Condition 3: 24 Hour
Replicate 10.73582715473411
Replicate 21.4137986468319
Replicate 30.56122319709993


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_246604.p1 GENE.R_Transcript_246604~~R_Transcript_246604.p1 ORF type:5prime_partial len:156 (+),score=23.28,zf-RVT|PF13966.2|1.3e-15,zf-RVT|PF13966.2|3.7e+03 R_Transcript_246604:3-470(+)
CCTACTCAACTTTTGCCTAAGCATGCCTTTATCAATGTAATGGCTATTGCAAATGGTCTGCCTACTCAAGACAATCTAGCTAGAAGAGGGATTCCCATGGCTAACAGGTGTGCTCTTTGCCACAGTGATCTGGAGAGTGTTAGTCACTTGTTCTTTGACTGCCCCCTCGCCAAGGAAGTCTGGAGACATATCTTGACATGGCTCGGAATTAATAGAAGAGGTTTGAGCCTCAAAGGCGAACTGAAGTGGTATCACAAGCATGTGAAGGGCAAGTGGCTCAAGAAGCAAAGAAGATGTGCACTAGTAACTACTGTGTATGAAATCTGGAAAGAGAGGAACAACAGAATTTTTCAGGGTAAACAGGGAGTAGCTAAGAAGATTGTTCATGACATCAGGTTTCTGGTGTCAGCTAGGCTGTTACATGTAGGAGGTATAGATGATGATGTTAAGTTCAATTATTTGCTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_246604.p1 GENE.R_Transcript_246604~~R_Transcript_246604.p1 ORF type:5prime_partial len:156 (+),score=23.28,zf-RVT|PF13966.2|1.3e-15,zf-RVT|PF13966.2|3.7e+03 R_Transcript_246604:3-470(+)
PTQLLPKHAFINVMAIANGLPTQDNLARRGIPMANRCALCHSDLESVSHLFFDCPLAKEVWRHILTWLGINRRGLSLKGELKWYHKHVKGKWLKKQRRCALVTTVYEIWKERNNRIFQGKQGVAKKIVHDIRFLVSARLLHVGGIDDDVKFNYLL*

Click here to download the sequence:
Link to NCBI Protein BLAST