Transcript Information: R_Transcript_246605.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value3E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.51416791421743
Replicate 20.29572254107462
Replicate 30.32263010698806
Condition 2: 8 Hour
Replicate 10.68974267457029
Replicate 21.1022969921711
Replicate 31.0226259504443
Condition 3: 24 Hour
Replicate 10.80837349393324
Replicate 21.0872310720707
Replicate 30.77069382700343


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_246605.p1 GENE.R_Transcript_246605~~R_Transcript_246605.p1 ORF type:complete len:142 (+),score=21.64,RVT_1|PF00078.23|5.1e-20 R_Transcript_246605:2517-2942(+)
ATGAACTTTCCCAATGATATTCCAGAGCTTATTTTTCCCCCAGAGCCATCATACAAATATGATACAGTGAGTTGGAAATTCATTGAAGAAGTACTCGGAACATTTGGTTTCCCTGTAGAGTTCATAGAGAAAATCCTAGCATGCATTACCACCTCAATATTTTCAATGAATGTAAATGGATGGCATAAGGGGTATTTTGAGGGTAAATGTGGCCTTCGGCAGGGTGACCCTCTTTCACCTTATCTTTTTGCCTTGAGTATGGAGTCCCTGTCAAGAATGTTAAGAAAGCTTAATAATAAACAAGGTTTTACTTATCACCCTAAATGCAGAAGAGTGGGAATTGCCCATTTAGTGTTTGCAGATGACTTGCTTATCTTCACAAGAGGGGATGAACCATCAATCAATGCTGTAGTGGACTGTGTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_246605.p1 GENE.R_Transcript_246605~~R_Transcript_246605.p1 ORF type:complete len:142 (+),score=21.64,RVT_1|PF00078.23|5.1e-20 R_Transcript_246605:2517-2942(+)
MNFPNDIPELIFPPEPSYKYDTVSWKFIEEVLGTFGFPVEFIEKILACITTSIFSMNVNGWHKGYFEGKCGLRQGDPLSPYLFALSMESLSRMLRKLNNKQGFTYHPKCRRVGIAHLVFADDLLIFTRGDEPSINAVVDCV*

Click here to download the sequence:
Link to NCBI Protein BLAST