Transcript Information: R_Transcript_246608.p1


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value5E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.91264804773594
Replicate 20.17496917013582
Replicate 30.38177895993587
Condition 2: 8 Hour
Replicate 11.4283421219226
Replicate 21.1180440920593
Replicate 31.6638976402021
Condition 3: 24 Hour
Replicate 10
Replicate 21.1027629445289
Replicate 30.91198769528739


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_246608.p1 GENE.R_Transcript_246608~~R_Transcript_246608.p1 ORF type:5prime_partial len:120 (+),score=17.06,zf-RVT|PF13966.2|1.3e-07,zf-RVT|PF13966.2|7.2e+02 R_Transcript_246608:1-360(+)
AAGAGAGGTATGCAGATGGCTAATAGATGTATCCTTTGCAAGCAACAAGAGGACACTACTCAGCACTTGTTCTCGAAATGTGATGTAGCTCAGCGAGTTTGGCAAAGCATTCTGACCTGGTTGGGCATCTCAAGGAGGGGAAAGAGCTTGAAAGGAGAACTTAAATGGTTCAATATCCATGTTAGGGGAAAGGCCTGGCAAAAGAAATGGAAGCAGAATGCCCTGGTAGCAACTGTATATGAAATCTGGAAAGAGAGAAACTCTAGATTATTTGCTGAGACAAAGAGATCTTTGGAACAAATTGTTTTTCATATTAAATATGTAGTTTGTATTAGAATTTTGTTCCACTGTAATCCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_246608.p1 GENE.R_Transcript_246608~~R_Transcript_246608.p1 ORF type:5prime_partial len:120 (+),score=17.06,zf-RVT|PF13966.2|1.3e-07,zf-RVT|PF13966.2|7.2e+02 R_Transcript_246608:1-360(+)
KRGMQMANRCILCKQQEDTTQHLFSKCDVAQRVWQSILTWLGISRRGKSLKGELKWFNIHVRGKAWQKKWKQNALVATVYEIWKERNSRLFAETKRSLEQIVFHIKYVVCIRILFHCNP*

Click here to download the sequence:
Link to NCBI Protein BLAST