Transcript Information: R_Transcript_246618.p1


Annotated TAIR IDAT5G18560.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)PUCHI
Annotation TypeOrtholog
Chromosome Positionchr5:6164859-6165905 | Reverse length=348
E-Value5E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.8203577957177
Replicate 21.1795674391179
Replicate 31.73730875027
Condition 2: 8 Hour
Replicate 10.55024415611787
Replicate 21.3190407827666
Replicate 30.76481505422979
Condition 3: 24 Hour
Replicate 11.3542526735443
Replicate 21.3629654370582
Replicate 31.4755755968695


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_246618.p1 GENE.R_Transcript_246618~~R_Transcript_246618.p1 ORF type:complete len:356 (+),score=49.18,AP2|PF00847.16|3.9e-10 R_Transcript_246618:133-1200(+)
ATGTCTTGTTCAAAACCCTCGGATCATAAAGCCTCGAATATGAGCGCCACCATGGTATTCCCACTGCTCCAGAGAAACACGGCCGTGTCGCAGCCCAACGAGAGGCGGGGACGCAAGAAGCTGGCGGAGCCGGGGCGGTTCCTCGGAGTCCGAAGGCGGCCATGGGGGCGGTACGCGGCCGAGATTCGAGATCCCACCACCAAGGAAAGGCATTGGCTGGGCACCTTCGATACTGCCCATGAAGCTGCCCTTGCTTATGATAGAGCAGCCCTTTCTATGAAGGGTACCCAAGCTAGAACTAACTTCCTTTACTCTCATGACTTCACCACTTCTTCTTTTCATCCTCTTCTAGTTTCTCCCTTTGACCATCATTCTTCTCCTCCTAATAATTCTCTTTTATTTAATAATTCCTCTCCTTCTTTTTCTCTCTCTCCTCCTCATGTTCCCCCGCATCCAAAAACAACAACTGCTACAAGTAATACTGCTGCTATTCCTATACTTTCAACAGAAAACAGCTCCTATCACAATGTCGTCTCCAGCCAATCGGATTTCAACACGTGTACCGATCGAACCTCTCCTCAATATCAGAGTGAGTTTAGCTTCTCATCTGTTACTGATGACAACTCTGGTTACTTGGGCTGCATTGTGCCTGAAAACTGCCTTAGACCACCACCTCCCCCTACTAATAAAACTGCTGACGACATTAAGAACCCCAACAGTATCAGTTCAACGAATCATGATGAGCATGAGAACACCACAGATAAAGGAGTGTTTTCTTGGGCAAGTGTACCCACATTAATGTCATATAATAACCATCAATATCCAGAAATGGTGGTGGAAGAAGGTGGATTACCATGGGAGATGCTAAACAATACAAATTATATTGCTAATAATGATTATTATTGTGATATCTCAGCCATGATTAACAGCAACCCATTCATGGTGGAAGATGTTTGCATGGGAGGAGCCCTGTATCCTATGCTTCATGACATGCCTTTTAATGCTGCTGTTGCTCCTACCTCTTCTTCGGGTGACATGCTTGATGACTTTGGGTATTCACTATTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_246618.p1 GENE.R_Transcript_246618~~R_Transcript_246618.p1 ORF type:complete len:356 (+),score=49.18,AP2|PF00847.16|3.9e-10 R_Transcript_246618:133-1200(+)
MSCSKPSDHKASNMSATMVFPLLQRNTAVSQPNERRGRKKLAEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGTQARTNFLYSHDFTTSSFHPLLVSPFDHHSSPPNNSLLFNNSSPSFSLSPPHVPPHPKTTTATSNTAAIPILSTENSSYHNVVSSQSDFNTCTDRTSPQYQSEFSFSSVTDDNSGYLGCIVPENCLRPPPPPTNKTADDIKNPNSISSTNHDEHENTTDKGVFSWASVPTLMSYNNHQYPEMVVEEGGLPWEMLNNTNYIANNDYYCDISAMINSNPFMVEDVCMGGALYPMLHDMPFNAAVAPTSSSGDMLDDFGYSLF*

Click here to download the sequence:
Link to NCBI Protein BLAST