Transcript Information: R_Transcript_246791.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value4E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.27938205542937
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.22817226368557
Replicate 30.092610258267281
Condition 3: 24 Hour
Replicate 10
Replicate 20.4501073242975
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_246791.p1 GENE.R_Transcript_246791~~R_Transcript_246791.p1 ORF type:5prime_partial len:196 (+),score=32.70,RVT_1|PF00078.23|3.4e-12 R_Transcript_246791:1-588(+)
CTACGCCAAGGGGATCCCTTGTCTCCCTTTCTTTTTACTTTGGTGGTGGACGTGCTTAGTCGGATGTTGGAAAGGGCGGTGGATAGAGGAGTGGTGGAGGGTTTTGCAGTGGGCCAAGGAGGGATGCAGGTGTCTCATCTACAGTTTGCTGATGATACTATCTTGTTTTTGAAAGCGGATCTGCCAAGTTTTAAGCACGCACTTACTATTCTGCAAGTGTTTGAGGTGGTTTCAGGGATGCGGGTGAACCTGGGAAAGAGTAGTGTGGCAGGGGTGAATGTGAGTCAAGGGGTGTTAGATTCTTTTGCTTCTTTGGCTGGCTGCCAAATTCAGAGTTGGCCTTGTGTTCCTCTCTGTGGTAATACAGTCGGTCTCTTTTTGGGACCCAGTGGTGGAAAGGGTTACTCGTCGGTTGGAGGGGTGGAAGGGTGCCTATTTCTCCTTTGGTGGGTGTATCACCCTGTTGCAGTCGTGCTTGTCCAGTATCCCCCTGTACTATTTATCCTTGTTTCGTATCCCAAAGTCCGTGGCAATGCAATTAGAGAAGTTGATGAGGGACTTCTTGTGGCATGGCTTGTCGGATGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_246791.p1 GENE.R_Transcript_246791~~R_Transcript_246791.p1 ORF type:5prime_partial len:196 (+),score=32.70,RVT_1|PF00078.23|3.4e-12 R_Transcript_246791:1-588(+)
LRQGDPLSPFLFTLVVDVLSRMLERAVDRGVVEGFAVGQGGMQVSHLQFADDTILFLKADLPSFKHALTILQVFEVVSGMRVNLGKSSVAGVNVSQGVLDSFASLAGCQIQSWPCVPLCGNTVGLFLGPSGGKGYSSVGGVEGCLFLLWWVYHPVAVVLVQYPPVLFILVSYPKVRGNAIREVDEGLLVAWLVGC*

Click here to download the sequence:
Link to NCBI Protein BLAST