Transcript Information: R_Transcript_246914.p1


Annotated TAIR IDAT5G33406.1
Annotated Gene NamehAT dimerisation domain-containing protein / transposase-related
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:12676126-12678403 | Reverse length=509
E-Value3E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.20070381104299
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.17940741546637


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_246914.p1 GENE.R_Transcript_246914~~R_Transcript_246914.p1 ORF type:5prime_partial len:122 (-),score=21.50,Dimer_Tnp_hAT|PF05699.10|7.6e-08 R_Transcript_246914:169-534(-)
ACTAAAACTTGTTGGGCTAACTTTGGTACCCAAACACCATTACTCCAATCATTAGCTTTTGAAGTGCCTGGCCAACCTACTTCTTCCTCATGTTGTGAGCGTAATTGGAGCACTTACTCTTTCATTCACTCACTTAGGAGGAGCAAGCTAACCCCTAAACATGCCGAAGATTTAGTTTTCATTCATAACAACCTATGTCTCTTATCAAGCAGCACCAATCAAGATCATGATGAGAAGACCAAAATGTGGGATGTTGGTGGAGATGAGTTTGATAATTTTGAGGATATGGGGTTTTTGGAGCTTGCCGAGCAATCTCTTAATGAGCCCGAGTTGGAGAATGTGTTTTTCAATGATAATGCCATGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_246914.p1 GENE.R_Transcript_246914~~R_Transcript_246914.p1 ORF type:5prime_partial len:122 (-),score=21.50,Dimer_Tnp_hAT|PF05699.10|7.6e-08 R_Transcript_246914:169-534(-)
TKTCWANFGTQTPLLQSLAFEVPGQPTSSSCCERNWSTYSFIHSLRRSKLTPKHAEDLVFIHNNLCLLSSSTNQDHDEKTKMWDVGGDEFDNFEDMGFLELAEQSLNEPELENVFFNDNAM*

Click here to download the sequence:
Link to NCBI Protein BLAST