Transcript Information: R_Transcript_247801.p1


Annotated TAIR IDAT4G19440.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:10602006-10604483 | Reverse length=825
E-Value5E-78
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.5945605347106
Replicate 21.0471970282443
Replicate 31.2567287459236
Condition 2: 8 Hour
Replicate 11.2212401469948
Replicate 22.1747491067487
Replicate 33.3044079184246
Condition 3: 24 Hour
Replicate 12.519061142192
Replicate 21.9800232420468
Replicate 32.7837230399795


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_247801.p1 GENE.R_Transcript_247801~~R_Transcript_247801.p1 ORF type:3prime_partial len:401 (+),score=72.65,PPR_2|PF13041.2|1.6e+04,PPR_2|PF13041.2|8.7,PPR_2|PF13041.2|0.00016,PPR_2|PF13041.2|1.7e-14,PPR_2|PF13041.2|8.9e-16,PPR_2|PF13041.2|1.6e-05,PPR_2|PF13041.2|5.1e-11,PPR_1|PF12854.3|6e+02,PPR_1|PF12854.3|1.3e+02,PPR_1|PF12854.3|8.6e-08,PPR_1|PF12854.3|7.6e-12,PPR_1|PF12854.3|0.00064,PPR_1|PF12854.3|1.2e-11,PPR|PF01535.16|7.2,PPR|PF01535.16|4.7e-05,PPR|PF01535.16|5.3e-09,PPR|PF01535.16|0.001,PPR|PF01535.16|8.6e-09,PPR_3|PF13812.2|8.4e+03,PPR_3|PF13812.2|94,PPR_3|PF13812.2|0.00027,PPR_3|PF13812.2|0.003,PPR_3|PF13812.2|0.59,PPR_3|PF13812.2|0.0043 R_Transcript_247801:163-1362(+)
ATGCGCGCCCCTACTATGGACTTGAGAAGGGTCTCCATCATCAAACCCACTTTCTACTTCTCTTCAGCTATACGCCCCCTTCGCTCGGCCCCACCGAAACCTAAACCTAAACCTAAACCTGTGGGGGACCCACCTCCACATCATCTTCAACCTCAACCTTTTGATCATGGCTTTGTCAAATGGGTTTCTTCAGTTCTATCAAGCCCATCTTTGGATTCCTCTAAATGTAAAGAAATTCTTACCAAGTTATCTCCTATACAATTTGATCATCTCTTTTTTCAGATTGGAATATTTGCTAATCCCATAGCTGTCTTGCGTTTCTTTTATTTCGGGTCTCAATCATGTGGGTATTCTTTTAGTGTTAAATCTTATTGTGGGTTGATTCGTTTACTTCTTTCTAAGAATTTGTTTGCCCCTGCTAGATTGCTTTTGATTAGATTGATTGATGGCAAAATGCCTGCTTCGTTTGATAGTGATGTTAGTTTGAGACATGTTGAGATTGCCAGGGCTATGGTGGATTTGAGTGCCGGTTCGAAAAATTCAGTTGGGGTTGCTACATTTGATTTGTTGGTTCATGTTTATTGTACTCAAATCAAGAATGCTGGGTTTGGTTTGGCTTTTGATGTGCTTGGGTTTTTGGCTGTGCGGGGCGTTTCCCCCTCTTTGAAAGCTTGTAACATCTTTTTGAGCTCGCTCCTTAAGGCTGGCGAGCTTGAGAGGGGTTATCAAGCATTTCAGATTATGTGCCGAGGGGTTAAGCCTGATGTTTATCTATATACCACTGCCATCAACTTGTTTTTCAAAGGTGGGAGGGTTAAGGATGCTGTGGGGTTGTTTTTGGAAATGGAGAAGCAAGGGATTTTGCCCTCCATTGTGACTTACAACAGTGTCCTGAATGGACTTTGCCAGTGCGGGGATTTAGATGAGGCATTCCAGTTCAAAGAGAGGATGGTAGAGAATGGTATCATCCCAAATATAACAACTTATGGCACTTTCATTAACGGTTTAGTTAAGCGTGAGAGATTTGATGAGGCTCATTACATGTTACAAGAATTGTTAGATAAGGGTCTTGTTGTTAATGACATTGTTTACAATACTTTGATTGATGGGTATTGTAGAGTAGGAAGAGTTGTTGAGGCTTTGAAGATAAAAGATGAAATGTTACAAATTGGAATATTGCCTAATTCATCATCCTATCAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_247801.p1 GENE.R_Transcript_247801~~R_Transcript_247801.p1 ORF type:3prime_partial len:401 (+),score=72.65,PPR_2|PF13041.2|1.6e+04,PPR_2|PF13041.2|8.7,PPR_2|PF13041.2|0.00016,PPR_2|PF13041.2|1.7e-14,PPR_2|PF13041.2|8.9e-16,PPR_2|PF13041.2|1.6e-05,PPR_2|PF13041.2|5.1e-11,PPR_1|PF12854.3|6e+02,PPR_1|PF12854.3|1.3e+02,PPR_1|PF12854.3|8.6e-08,PPR_1|PF12854.3|7.6e-12,PPR_1|PF12854.3|0.00064,PPR_1|PF12854.3|1.2e-11,PPR|PF01535.16|7.2,PPR|PF01535.16|4.7e-05,PPR|PF01535.16|5.3e-09,PPR|PF01535.16|0.001,PPR|PF01535.16|8.6e-09,PPR_3|PF13812.2|8.4e+03,PPR_3|PF13812.2|94,PPR_3|PF13812.2|0.00027,PPR_3|PF13812.2|0.003,PPR_3|PF13812.2|0.59,PPR_3|PF13812.2|0.0043 R_Transcript_247801:163-1362(+)
MRAPTMDLRRVSIIKPTFYFSSAIRPLRSAPPKPKPKPKPVGDPPPHHLQPQPFDHGFVKWVSSVLSSPSLDSSKCKEILTKLSPIQFDHLFFQIGIFANPIAVLRFFYFGSQSCGYSFSVKSYCGLIRLLLSKNLFAPARLLLIRLIDGKMPASFDSDVSLRHVEIARAMVDLSAGSKNSVGVATFDLLVHVYCTQIKNAGFGLAFDVLGFLAVRGVSPSLKACNIFLSSLLKAGELERGYQAFQIMCRGVKPDVYLYTTAINLFFKGGRVKDAVGLFLEMEKQGILPSIVTYNSVLNGLCQCGDLDEAFQFKERMVENGIIPNITTYGTFINGLVKRERFDEAHYMLQELLDKGLVVNDIVYNTLIDGYCRVGRVVEALKIKDEMLQIGILPNSSSYH

Click here to download the sequence:
Link to NCBI Protein BLAST