Transcript Information: R_Transcript_248828.p1


Annotated TAIR IDAT3G54070.1
Annotated Gene NameAnkyrin repeat family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:20021330-20023603 | Reverse length=574
E-Value4E-76
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.57040502983496
Replicate 20
Replicate 30.12632392056702
Condition 2: 8 Hour
Replicate 10.22505390576512
Replicate 20.12331368662419
Replicate 30
Condition 3: 24 Hour
Replicate 10.08440370304303
Replicate 20.040542755313561
Replicate 30.16093900505072


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_248828.p1 GENE.R_Transcript_248828~~R_Transcript_248828.p1 ORF type:5prime_partial len:544 (+),score=69.83,Ank_2|PF12796.3|3.2e-09,Ank_2|PF12796.3|0.021,Ank_2|PF12796.3|0.34,PGG|PF13962.2|4.2e-15,Ank_4|PF13637.2|8.7e+03,Ank_4|PF13637.2|6.6,Ank_4|PF13637.2|1.1e-06,Ank_4|PF13637.2|1.6e+03,Ank_4|PF13637.2|15,Ank_4|PF13637.2|1.3,Ank_3|PF13606.2|1.6e+04,Ank_3|PF13606.2|11,Ank_3|PF13606.2|1.4,Ank_3|PF13606.2|0.087,Ank_3|PF13606.2|1.7e+03,Ank_3|PF13606.2|1.6e+03,Ank_3|PF13606.2|9.1e+02,Ank_3|PF13606.2|7.9e+02,Ank_3|PF13606.2|9.4e+02,Ank_5|PF13857.2|6.9e+03,Ank_5|PF13857.2|0.28,Ank_5|PF13857.2|2.4e+02,Ank_5|PF13857.2|0.045,Ank_5|PF13857.2|2.5e+03,Ank_5|PF13857.2|8.7e+03,Ank_5|PF13857.2|8.7e+03,Ank_5|PF13857.2|1.6e+02,Ank|PF00023.26|8.2,Ank|PF00023.26|36,Ank|PF00023.26|1.3,Ank|PF00023.26|2.2e+02,Ank|PF00023.26|7.5e+03,Ank|PF00023.26|5.4e+02 R_Transcript_248828:3-1634(+)
CTGTATCAAGCTGCACTAAACGGTGATTGGGAAGATGCAAGACCAATTCTTGAATTGCGTAAAGATTACATAGGAGACAAAATTACAGAACGAGGCGACACAGTGTTACATGTTGCAGCAACAGCAAGGCGAACAAACTTCGTGGCAGAATTGGTGAATTTGATGATTATAAGATGTCAAGAAGAAGAAATACTGGGTTTGCAAAACGCGGCTGGAAACACAGCTCTATTCCTGGCAGCAGCATCTGGCACTGTCCCAATTGCCAAGATTATGGTAAACTCACTTCCTCGTTTGCCTATGATTCGTACAAACAAGGAGCTTACACCACTCCACATTGCTGCTCTCTTAGGCCATAGAGATATGGTCAGGTATCTCTGGCCTCTCACCAAGGCTCACCTTAAAGAAAATGATCTCATTGAAGTACTCATCAGCACCATCAATACAGATTTATATGATGTGGCCCTAGATGTCTTGCATGCACACCCTGAATTAGCTGTTACTCGAAACAAAGAGGAGATCACTCCTTTGCATGTTTTGGCTCGAAAGTCTAGCAAAAGCGATGGAAACCAACCTAGCATGTGGAGACGATGCAGCAGTATATTTGCCAGCAATTGCAGAAATTATACTGAAAATCAATTGCAGCGTCTTAGATTGGTTGATCTCATATGCGCAAAGCTTGTATTGGAAACCCAGTCCAAGATCAAGGACCTAATGGATAAACCTTCACCGCTGATATTTGATGCTGTAAAGGAAGGCAATGTCGAGTTCCTCACTAAGCTAATCCGCTCTTATCCCGACTTTATTTGGAAATTTGACAGCAATAACCGAAGCATATTTCATGTGGCCATTGTATATCGTCAAGAGAAGATTTTCCGACTAATATACGAGATTGGGGCTATCAAGGATTTGTTGGCTTACTATAGAGATAATCAAAAAAACAGCATGCTTCATCTGGCCGCCAAGTTACCCACTTCCGATAGACTTGACTCCATTTCAGGGGCAGCCCTTCAAATGCAGCGCGAGATGTGGTGGTTTAAGGTGATTGAAGATCTTGTGCAGCCTCAAATTGCACTAGCTAAAAATGACGATGGGCAAAGAGCACGAGCTTTATTTATCAAGGAACACGCAGATTTGAGGAAAAGAGGAGAGAAATGGATCACAAAGACTGCTTCTTCGTGTAGTGTTGTTGCCACACTGATGGCATCAGTAGTTTTTGCGGCAATCTTGAAGGTGCCGGGGAGTATTAACAATGGTGGATGGTTTTGGTTATTTGCCATGTCCGATTCACTGTCATTGATATCATCCACTGCCTCAATCTTGATGTTCTTGTCCATCCTCACTTCAAGGTATTTACAGAAAGACTTCCTCCGTTCATTGCCTCTCAAACTGATGTTTGGTCTCGCATTGCTCTTCTTCTCCATAATCACCATGATGGTTGCCTTCACTGCCATTTTCAGCATCACTGTTCCACGTAATAAAATAAGGTTGACATGGATCTTGATTGCAGTCTTGGCCGCTATCCCCATCGCTGTATTTTTTAAACTAATGCTCCCTCTCTTTCTCGACATTCGCCGTTCAACTAATCGCTGCAAGGCATATTCCAAGGCGAAAGATCAACTTTTTGGTTATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_248828.p1 GENE.R_Transcript_248828~~R_Transcript_248828.p1 ORF type:5prime_partial len:544 (+),score=69.83,Ank_2|PF12796.3|3.2e-09,Ank_2|PF12796.3|0.021,Ank_2|PF12796.3|0.34,PGG|PF13962.2|4.2e-15,Ank_4|PF13637.2|8.7e+03,Ank_4|PF13637.2|6.6,Ank_4|PF13637.2|1.1e-06,Ank_4|PF13637.2|1.6e+03,Ank_4|PF13637.2|15,Ank_4|PF13637.2|1.3,Ank_3|PF13606.2|1.6e+04,Ank_3|PF13606.2|11,Ank_3|PF13606.2|1.4,Ank_3|PF13606.2|0.087,Ank_3|PF13606.2|1.7e+03,Ank_3|PF13606.2|1.6e+03,Ank_3|PF13606.2|9.1e+02,Ank_3|PF13606.2|7.9e+02,Ank_3|PF13606.2|9.4e+02,Ank_5|PF13857.2|6.9e+03,Ank_5|PF13857.2|0.28,Ank_5|PF13857.2|2.4e+02,Ank_5|PF13857.2|0.045,Ank_5|PF13857.2|2.5e+03,Ank_5|PF13857.2|8.7e+03,Ank_5|PF13857.2|8.7e+03,Ank_5|PF13857.2|1.6e+02,Ank|PF00023.26|8.2,Ank|PF00023.26|36,Ank|PF00023.26|1.3,Ank|PF00023.26|2.2e+02,Ank|PF00023.26|7.5e+03,Ank|PF00023.26|5.4e+02 R_Transcript_248828:3-1634(+)
LYQAALNGDWEDARPILELRKDYIGDKITERGDTVLHVAATARRTNFVAELVNLMIIRCQEEEILGLQNAAGNTALFLAAASGTVPIAKIMVNSLPRLPMIRTNKELTPLHIAALLGHRDMVRYLWPLTKAHLKENDLIEVLISTINTDLYDVALDVLHAHPELAVTRNKEEITPLHVLARKSSKSDGNQPSMWRRCSSIFASNCRNYTENQLQRLRLVDLICAKLVLETQSKIKDLMDKPSPLIFDAVKEGNVEFLTKLIRSYPDFIWKFDSNNRSIFHVAIVYRQEKIFRLIYEIGAIKDLLAYYRDNQKNSMLHLAAKLPTSDRLDSISGAALQMQREMWWFKVIEDLVQPQIALAKNDDGQRARALFIKEHADLRKRGEKWITKTASSCSVVATLMASVVFAAILKVPGSINNGGWFWLFAMSDSLSLISSTASILMFLSILTSRYLQKDFLRSLPLKLMFGLALLFFSIITMMVAFTAIFSITVPRNKIRLTWILIAVLAAIPIAVFFKLMLPLFLDIRRSTNRCKAYSKAKDQLFGY*

Click here to download the sequence:
Link to NCBI Protein BLAST