Transcript Information: R_Transcript_24886.p2


Annotated TAIR IDAT3G05250.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:1495635-1497387 | Forward length=278
E-Value3.4E-83
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.868688092514
Replicate 211.419040577285
Replicate 314.94966032591
Condition 2: 8 Hour
Replicate 110.395753188129
Replicate 210.278159723492
Replicate 311.910004161447
Condition 3: 24 Hour
Replicate 111.519180468638
Replicate 29.8281329091344
Replicate 310.905452861542


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_24886.p2 GENE.R_Transcript_24886~~R_Transcript_24886.p2 ORF type:complete len:285 (+),score=34.28,zf-C3HC4|PF00097.21|5.9e-08,zf-RING_2|PF13639.2|4.2e-08,zf-RING_2|PF13639.2|9.4e+03,zf-RING_2|PF13639.2|6.9e+03,zf-C3HC4_2|PF13923.2|3.5e-06,zf-C3HC4_2|PF13923.2|77 R_Transcript_24886:486-1340(+)
ATGGAGCAAGAAGAACAAGAACACGGAGAGCGCACCTGTAACCCGAACCCGGATCTGAATCCAAATCCATGTCCTATATGTCTCGGACTCCTTGCCCAAGACCAAGATGCCTATCTGGATCGCTGCTTCCACAAATTTTGCTACCAATGTATAGTTCGTTGGACTCAAGTGGTTTCTAACCGCTCTTCTTCTGGTCAGACATCCTTTGTCAAGTGCCCTTTATGCAAGACGGAGAACTTTTCGATTATCTATGGTTACGATGGACATACATTTCATCAGCATTTTGTCAACCAAAATAATGGTAATAGTACCTTCTTCTCAAAGGCTCACAAATATAGATTACAGTGTTATTATACCCAACCATGTATATTAACTGACAAATTTAAAGTGGGACACTATTGGAAGTCTCATAGATATCTTCAGCTCAACAAGTGGCTTGAGAAATGGATTAAGAGAGAACTACAAGCTCTGTTACAGGAAGAAGACGTTGACATCATCATGCATCACATGCTTGGGGTGATTGAGTCATTCTCAAGAAGACACGATCCCAAGGGCTTGAAGTGTGCACCCCTGCTGAAGCAAGAAGAATTCAAGCGTATAGTGGCTGATGCTGCAAGGCCTTTCTTGACAGCAAGAACGGAGCGATTTGTTGAGGAGGTGGAACTATTTCTCGCCTCAGGCTTGACTGTTGAAGCCTACGATGAAGCTTATACGAGGTATTTAGGATGGAAGAAGCCGGAGGAAACCTCAGCACATACAGGAATAAATGGCAGTGAGCAAGATCCTGTAGCCTCGTACTTGCATTTTTTCGATGACGATTCTGATGAAGCTGATTTCTCAGAGGATATACAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_24886.p2 GENE.R_Transcript_24886~~R_Transcript_24886.p2 ORF type:complete len:285 (+),score=34.28,zf-C3HC4|PF00097.21|5.9e-08,zf-RING_2|PF13639.2|4.2e-08,zf-RING_2|PF13639.2|9.4e+03,zf-RING_2|PF13639.2|6.9e+03,zf-C3HC4_2|PF13923.2|3.5e-06,zf-C3HC4_2|PF13923.2|77 R_Transcript_24886:486-1340(+)
MEQEEQEHGERTCNPNPDLNPNPCPICLGLLAQDQDAYLDRCFHKFCYQCIVRWTQVVSNRSSSGQTSFVKCPLCKTENFSIIYGYDGHTFHQHFVNQNNGNSTFFSKAHKYRLQCYYTQPCILTDKFKVGHYWKSHRYLQLNKWLEKWIKRELQALLQEEDVDIIMHHMLGVIESFSRRHDPKGLKCAPLLKQEEFKRIVADAARPFLTARTERFVEEVELFLASGLTVEAYDEAYTRYLGWKKPEETSAHTGINGSEQDPVASYLHFFDDDSDEADFSEDIQ*

Click here to download the sequence:
Link to NCBI Protein BLAST