Transcript Information: R_Transcript_248875.p1


Annotated TAIR IDAT5G42890.1
Annotated Gene Namesterol carrier protein 2
Annotated Gene Symbol(s)ATSCP2, SCP2
Annotation TypeHomolog
Chromosome Positionchr5:17194458-17195910 | Reverse length=123
E-Value8E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.77672174275399
Replicate 20.98280555140119
Replicate 30.68232835392794
Condition 2: 8 Hour
Replicate 10.52097584994139
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.58615678028181
Replicate 20.18770433098364
Replicate 30.6519741821629


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_248875.p1 GENE.R_Transcript_248875~~R_Transcript_248875.p1 ORF type:5prime_partial len:235 (+),score=56.67,SCP2|PF02036.13|1.8e-26,SCP2|PF02036.13|5.3e-23,Alkyl_sulf_C|PF14864.2|4.1e-07,Alkyl_sulf_C|PF14864.2|0.0023 R_Transcript_248875:1-705(+)
CAACAACAAAGAATGTCGTCAACTGCTTTATTTGAAGAATTAGGTAAACACGTTTCTGCTGAAATTGTTAACAAAGTTAAAGGAGTTTACCTTTTCAAAATTACTGGTGGAGACTCCTGGACTGTTGATCTTAAAAACGGTAATGGTGCTGTAAAGAAGGGTCAAGAAGGAACTCCTGATTGTACCATCACTATTGCTGATGAAGACTTTGTTGGTTTAATTACTGGAAAAGCGAATGGTCAACAACTGTTTATGAGTGGAAAAATTAAAATCTCCGGAAACATGGCTTTAGCTATGAAATTAGAAGTTCTCAAACAAATGGCTCCTAAAGGTGGTGTTACCGCTGCTGCTGCTAATGCTTCTGAATTCAAATCTGATGCTATCTTCCCTGAACTCGGTAAAAGAATGAAAGAAGATCCCTCTGTCATTAACAAAATTGGTGGAGTATATCTCTTTGTTATTGCCGGACCAAATGGTGCTAAAAAATCATGGATTGTTGATGCTAAAAACGCACCAGGAGAAGTTAAAGAAGGTGAAGGAAAAGCTGATTGTACTATTAACATTACCGATGATGACTTTGTTAACCTCATTACTGGTAAAGCCAACGGTCAACAATTATTCATGGGTGGTAAACTTAAGATTGCTGGTAACATGGGACTTGCTATGAAACTTGGCCAACTCTCTGCTCCAAAAGCTTCTCTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_248875.p1 GENE.R_Transcript_248875~~R_Transcript_248875.p1 ORF type:5prime_partial len:235 (+),score=56.67,SCP2|PF02036.13|1.8e-26,SCP2|PF02036.13|5.3e-23,Alkyl_sulf_C|PF14864.2|4.1e-07,Alkyl_sulf_C|PF14864.2|0.0023 R_Transcript_248875:1-705(+)
QQQRMSSTALFEELGKHVSAEIVNKVKGVYLFKITGGDSWTVDLKNGNGAVKKGQEGTPDCTITIADEDFVGLITGKANGQQLFMSGKIKISGNMALAMKLEVLKQMAPKGGVTAAAANASEFKSDAIFPELGKRMKEDPSVINKIGGVYLFVIAGPNGAKKSWIVDAKNAPGEVKEGEGKADCTINITDDDFVNLITGKANGQQLFMGGKLKIAGNMGLAMKLGQLSAPKASL*

Click here to download the sequence:
Link to NCBI Protein BLAST