Transcript Information: R_Transcript_248935.p2


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value5E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.7214774762048
Replicate 21.6307806148581
Replicate 34.2255147022029
Condition 2: 8 Hour
Replicate 12.1395415973321
Replicate 21.9538634618512
Replicate 31.7622922932414
Condition 3: 24 Hour
Replicate 10.44578266461561
Replicate 21.9271585438368
Replicate 31.48751391076


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_248935.p2 GENE.R_Transcript_248935~~R_Transcript_248935.p2 ORF type:5prime_partial len:103 (-),score=25.76,gag_pre-integrs|PF13976.2|2.6e-16 R_Transcript_248935:8-316(-)
ACAGGGTGTGAGAACATGGTTGCTGCTACCACAAGAGATGAGGTCAAGCTTTGGCACAATAGGCTTGGCCACATGAGTGAGAAAGGGATGAAAATTATGGCTTCGAGACGTAAACTTTCCAATGTGAAATCAGTTGATCTTGAGGTTTGTGAGAGTTGTGTGATGGGGAAGCAGAAGAGAGTTACTTTCACAAAGAACAAGAGAGAGTTGAGAAAGGAGAAGCTGGAGTTGGTGCACACTGACGTATGGGGTCCATACCACACAAAATCCCTGATGACTTCAGCAGGAAGGTGTGGGTCTACTTCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_248935.p2 GENE.R_Transcript_248935~~R_Transcript_248935.p2 ORF type:5prime_partial len:103 (-),score=25.76,gag_pre-integrs|PF13976.2|2.6e-16 R_Transcript_248935:8-316(-)
TGCENMVAATTRDEVKLWHNRLGHMSEKGMKIMASRRKLSNVKSVDLEVCESCVMGKQKRVTFTKNKRELRKEKLELVHTDVWGPYHTKSLMTSAGRCGSTS*

Click here to download the sequence:
Link to NCBI Protein BLAST