Transcript Information: R_Transcript_24896.p1


Annotated TAIR IDAT1G78420.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:29505278-29507272 | Forward length=401
E-Value4.1E-114
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.916076680239
Replicate 213.077280536103
Replicate 316.684665273322
Condition 2: 8 Hour
Replicate 117.495955403481
Replicate 219.73018985987
Replicate 321.857302753961
Condition 3: 24 Hour
Replicate 117.953164129623
Replicate 213.011839587693
Replicate 318.479584579941


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_24896.p1 GENE.R_Transcript_24896~~R_Transcript_24896.p1 ORF type:complete len:578 (+),score=137.56 R_Transcript_24896:356-2089(+)
ATGGGGAATAAACTGGGGAGACGCCGTCATGTGGTGGACGAAAAGTATACGAAGCCACAAGGGTTGTATCAAATCAAAGATGTTGATTATAAGAAGCTTAGGAAGCTTATTCTTGAATCTAAGCTTGCCCCTTGTTACCCTGGAGGTGATGAGTGCGATTACGGCGTCCTTGAAGAATGCCCTATTTGTTTTCTGTATTATCCTACTCTTAATCGATCAAGATGTTGTATGAAGAGTATATGTACAGAGTGTTTTCTACAGATGAAGAATCCGAATTCTACTAGACCTACTCAATGCCCATTCTGTAAAACTTCCAATTATGCTGTTGAGTATCGGGGTGTAAAGTCAAAGGAGGAGAGGGGAATGGAGCAAATTGAAGAACAAAAGGTCATTGAAGCCAAGATTAGGATGCGTCAGCAGGAGCTTCAGGAGGAAGAAGACAGACAAAACAGAAATGAATTAAGAAGCTCTCCAAGCAGACCTCTACAAACAGGGAACCCTAGCTGTAGCACATCTGGAGTCGTAGAGTGTGAAGAAGTTGTCCCCTCTCAAGATTCAAGTGTAACCCAAATGCTTCAACGACCACAAAATCCCAGGCAAAACAGAGATGATGAATTTGATCTGGACCTTGAAGATATCATGGTTATGGAAGCTATATGGCTTTCGATACAGGAGAATGGAACAGCCAAACATCCTCCTCCTGGTGATGCTTTGCCTGAGCAGTATGCTGCTGAAGATCGCTACATGTCACCAGTGACAGGACCAGTGGTCGGATCATCGTCATCTCCTTCTGGTGGTCTTGCATGTGCAATTGCGGCCCTCGCTGAGCGTCAGCAGTTGACTGGAGAATCTTCCACCGGCGGTAGCGGACATGTGTCACCTTTAGACATGCTTCCGAGCACCAGCCAGAGTTTAAAGAGGGTGAAGAAGAATCAACGAAACCCACCAGAAAACTCTATATCCGCAAAGGAAATGTATAGTGCAAGGATGTCTGCTCAAGAATACATGGTTGATCATTCATCTGAGATCACCAGGCCAGGTACCAGCTATGCTTGCTCCAATGAGTCTGGAGATGAAGCTACTATACTGCCACCACCACCTCCACCGCTCTATGGTAGGCGAAATTCTAAGAGGGTAAAAAATATTCAAAAAAAATATTCTCATCTCGAGAGAACGTCTTCCAAGGTTGTTTCTGATGAAAGGATGTTAGGAGAAGAATGGGATTTTGATCATGGCTCTATGGTCGCTGAAGCTGGGACCTCTTATGCTAGCTCCGATGAGTCAAATGAGAGCATTGAGGCGACTGCTTTGCCCCCTCCACCAGCACCACCACTGTTGTGGAACATTTATGGCATTTCTAATGAGTCTCATGAGGGCCTCCAATCTCATCGACCACCTTTGTCAGCATACAATGAAGTTGGTACTAGTGTTGGCTGTTCAGATGACGGGGAAAATGGCGGTGATTACCTATCCCTAGTGCCACCTCCACCCCTACAACTGTCAGCTTGTGATGATGCCAGTACTAGAGGTACCTGTTCAGATGATGGCAGGGGGTACCTGGCCTTAACACCACCTCCATCATCCCAGCAATATAGTCAAGATGGCGGCTTTCAGTCTGCCATGCCCAGCCCAATAGTTCCTGAGAGTTTTGAGGAACAGATGATGCTGGCCATGGCTGTTTCTCTAGCTGAGGCTCGAGCCAGGACAACTGCCCAGGGAGTTGCATGGCAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_24896.p1 GENE.R_Transcript_24896~~R_Transcript_24896.p1 ORF type:complete len:578 (+),score=137.56 R_Transcript_24896:356-2089(+)
MGNKLGRRRHVVDEKYTKPQGLYQIKDVDYKKLRKLILESKLAPCYPGGDECDYGVLEECPICFLYYPTLNRSRCCMKSICTECFLQMKNPNSTRPTQCPFCKTSNYAVEYRGVKSKEERGMEQIEEQKVIEAKIRMRQQELQEEEDRQNRNELRSSPSRPLQTGNPSCSTSGVVECEEVVPSQDSSVTQMLQRPQNPRQNRDDEFDLDLEDIMVMEAIWLSIQENGTAKHPPPGDALPEQYAAEDRYMSPVTGPVVGSSSSPSGGLACAIAALAERQQLTGESSTGGSGHVSPLDMLPSTSQSLKRVKKNQRNPPENSISAKEMYSARMSAQEYMVDHSSEITRPGTSYACSNESGDEATILPPPPPPLYGRRNSKRVKNIQKKYSHLERTSSKVVSDERMLGEEWDFDHGSMVAEAGTSYASSDESNESIEATALPPPPAPPLLWNIYGISNESHEGLQSHRPPLSAYNEVGTSVGCSDDGENGGDYLSLVPPPPLQLSACDDASTRGTCSDDGRGYLALTPPPSSQQYSQDGGFQSAMPSPIVPESFEEQMMLAMAVSLAEARARTTAQGVAWQ*

Click here to download the sequence:
Link to NCBI Protein BLAST