Transcript Information: R_Transcript_249004.p1


Annotated TAIR IDAT5G42905.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17201414-17202323 | Reverse length=258
E-Value2E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.57399248285279
Replicate 20.61624361808841
Replicate 30.67231514957261
Condition 2: 8 Hour
Replicate 10.41066440163095
Replicate 20.51565974895816
Replicate 30.68496643850517
Condition 3: 24 Hour
Replicate 10.38503659920678
Replicate 20.46237440022175
Replicate 30.91772346695586


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_249004.p1 GENE.R_Transcript_249004~~R_Transcript_249004.p1 ORF type:complete len:477 (+),score=60.22,zf-RVT|PF13966.2|7.6e-22,zf-RVT|PF13966.2|1.1e+04,RVT_3|PF13456.2|7.1e-20,RNase_H|PF00075.20|5.8e-07 R_Transcript_249004:256-1686(+)
ATGTTTGAGAGAAAGACTGGTGTTTCTACGACATGGCGGGGAATTCTGGAGAATGCTCAGTTCATTCGCCAAGGGACTAATGCGGCTATCTCGAGTGGTCGCTCAACACTTTTCTGGCATCATAACTGGGCTCTGAATCAGCCTCTATCTGAAGTGGCGACGAGGGAAATTCCTCTGGAACTGGAGGATGCAACCGTGGCAGAAATGTGGGACACCCAAAGAGGTTGGCGATGGGAAAATTTTGCTGATTGGTTACCGCTTGAGGTACTAGAAACTATTGATTCACATGCAGTAGTTGAGGATGATGAAGATGCAGACTCCCTATTTTGGAATGGCACACCTACAGGTGGCTTTTCAATAAAATCAGCCCTGCGCATAATTCGACAAGGGTCCATTCTTCCCTCATGTCATAGCTGGAAATGTCTATGGAAAGCTCCTTTACCACAAAGGATAAAGTTCTTTATTTGGTTGGCCTTTCATGATCGCCTACTCACCAATGCCAATAGGTTTATAAGGGGGCTAACTGATGATGCTCGCTGTGGGATATGCGGTGCTATGGAGGAAAATGCTGATCACCTATTGCGTACATGCCCTGCAGCAACTAGCATATGGCGAAAACTGGGCTGGTCAGGGGAGGCTTTATACTCACAACCTTTGCGAGCTTGGTTGGAGCATAACCTCCAAGGAGATGCTGGACAGGAGAGGCAGATCATCATCTTTGGGGTTACGCTATGGTGGCTATGGCATTGGAGAAATGAACGCGTTTTTGCAGATGGTGCATCAATTCCTCTAGATCAATGCAAATTCATCAAAGAAAGAACGACTGAGATTGAAAGTGCTTTTGGTCTGGATCAGAAACTCATGTTGGCAAATGATCCAAGAAAAAAGGAGCTACTAGTTAGGTGGTGTACTCCCCCTGATGGTTGGGTCAAGCTAAACACTGATGGTGCATCGAAGGGCAATCCAGGCAAGGCAGGCGGAGGAGGAATTATTCGTAACTCACTGGGAAAGTTCTTGATTGGGTTCTCAGCATCTTATGGCCGCTGTACTAGTGTCAAAGCTGAACTCTGGGCTATACTTATGGGATTATCTCATGCCTGGGATCTTGGATGCTGCAAAGTGAAGGTGGAGACGGATTCAAACACGACTATTGCTATGCTGGGAGGTACAACATCGCAGGCTTCCGCCAACTACCAATTGCTCAACAAATGTCGCATGCTTATGCGTAAGGAGGGTTGGGAAGTTCATATTGCCCACTGTTATAGAGAAATGAACCAAGTCGCGGATAAATTAGCTAACATGGGAGTAGATCAACCCGAGAAGCTTGTGGTGTATCATAGCCCTCCCATGGCAATAGGACCTTTGCTTAGAAATGATGAGATAGGTATTGCATGGCCTAGAATGGTCTCATGCAAGGTTTCAAGTAGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_249004.p1 GENE.R_Transcript_249004~~R_Transcript_249004.p1 ORF type:complete len:477 (+),score=60.22,zf-RVT|PF13966.2|7.6e-22,zf-RVT|PF13966.2|1.1e+04,RVT_3|PF13456.2|7.1e-20,RNase_H|PF00075.20|5.8e-07 R_Transcript_249004:256-1686(+)
MFERKTGVSTTWRGILENAQFIRQGTNAAISSGRSTLFWHHNWALNQPLSEVATREIPLELEDATVAEMWDTQRGWRWENFADWLPLEVLETIDSHAVVEDDEDADSLFWNGTPTGGFSIKSALRIIRQGSILPSCHSWKCLWKAPLPQRIKFFIWLAFHDRLLTNANRFIRGLTDDARCGICGAMEENADHLLRTCPAATSIWRKLGWSGEALYSQPLRAWLEHNLQGDAGQERQIIIFGVTLWWLWHWRNERVFADGASIPLDQCKFIKERTTEIESAFGLDQKLMLANDPRKKELLVRWCTPPDGWVKLNTDGASKGNPGKAGGGGIIRNSLGKFLIGFSASYGRCTSVKAELWAILMGLSHAWDLGCCKVKVETDSNTTIAMLGGTTSQASANYQLLNKCRMLMRKEGWEVHIAHCYREMNQVADKLANMGVDQPEKLVVYHSPPMAIGPLLRNDEIGIAWPRMVSCKVSSR*

Click here to download the sequence:
Link to NCBI Protein BLAST