Transcript Information: R_Transcript_249089.p1


Annotated TAIR IDAT5G13260.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48860.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4243164-4246677 | Forward length=537
E-Value2.4E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.51210488820239
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.27997325887444
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_249089.p1 GENE.R_Transcript_249089~~R_Transcript_249089.p1 ORF type:internal len:82 (+),score=12.78 R_Transcript_249089:3-245(+)
GCTCAGCTTCGGCGTCCAAATTTTTCTAGATTATCCATCTCAGATCTATCTCCAGGAGATGTCAAGTATCTGGAGGCCTTTGTCATAGGATTTCTATCGATGAAACCTCTTTGTCCTTGCAATCCCTTAGTTGAAACCTCTTTGTTGGCAGAATTAAGTCCGGAGGAGTCTGAAGATGTTCTTTTCAAAGAGGCATGGCTGACATATTTCTGGAGAAGAGCTTTTACTCTTAGCATAGAAAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_249089.p1 GENE.R_Transcript_249089~~R_Transcript_249089.p1 ORF type:internal len:82 (+),score=12.78 R_Transcript_249089:3-245(+)
AQLRRPNFSRLSISDLSPGDVKYLEAFVIGFLSMKPLCPCNPLVETSLLAELSPEESEDVLFKEAWLTYFWRRAFTLSIEK

Click here to download the sequence:
Link to NCBI Protein BLAST