Transcript Information: R_Transcript_249090.p1


Annotated TAIR IDAT5G13260.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48860.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4243164-4246677 | Forward length=537
E-Value2.7E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0864857711142
Replicate 20.24995595733688
Replicate 31.3634962854853
Condition 2: 8 Hour
Replicate 10
Replicate 21.0648038971993
Replicate 30.43218120524731
Condition 3: 24 Hour
Replicate 10.27330722890124
Replicate 21.0502504233608
Replicate 32.084543303514


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_249090.p1 GENE.R_Transcript_249090~~R_Transcript_249090.p1 ORF type:3prime_partial len:84 (+),score=7.06 R_Transcript_249090:1378-1626(+)
ATGCCTAAGCAACTGGATTTTTTTTTGTCTTTTGAAGAATCATTTTCAAACTATAGATTTGTGATAGCTTCTAATTGTCATTTTCAAGTCATAGGATTTCTATCGATGAAACCTCTTTGTCCTTGCAATCCCTTAGTTGAAACCTCTTTGTTGGCAGAATTAAGTCCGGAGGAGTCTGAAGATGTTCTTTTCAAAGAGGCATGGCTGACATATTTCTGGAGAAGAGCTTTTACTCTTAGCATAGAAAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_249090.p1 GENE.R_Transcript_249090~~R_Transcript_249090.p1 ORF type:3prime_partial len:84 (+),score=7.06 R_Transcript_249090:1378-1626(+)
MPKQLDFFLSFEESFSNYRFVIASNCHFQVIGFLSMKPLCPCNPLVETSLLAELSPEESEDVLFKEAWLTYFWRRAFTLSIEK

Click here to download the sequence:
Link to NCBI Protein BLAST