Transcript Information: R_Transcript_24936.p1


Annotated TAIR IDAT3G01410.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:153650-155439 | Reverse length=294
E-Value0.0006
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 167.511509602609
Replicate 235.993657856511
Replicate 339.831135239738
Condition 2: 8 Hour
Replicate 148.425170409061
Replicate 244.572025634328
Replicate 349.673827278113
Condition 3: 24 Hour
Replicate 147.914173566749
Replicate 233.969037130577
Replicate 340.404312000143


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_24936.p1 GENE.R_Transcript_24936~~R_Transcript_24936.p1 ORF type:5prime_partial len:448 (+),score=68.73,RVT_3|PF13456.2|1.1e-12,RVT_3|PF13456.2|1.8e-10,RNase_H|PF00075.20|2.4e+03,RNase_H|PF00075.20|0.079,RNase_H|PF00075.20|1 R_Transcript_24936:2-1345(+)
GAGTATCAACTCATTATATATACTAGTAGTACTATAATATACTTCTCCATAACAAGGCACACAAACATAAATCTCAAGAGAACAAAGAGAAAAAAGAGAGGGAAAAAAAAAAGCTTAGTGAAATTAATCATGTCTTTTCTACTAGGTGGTAGTTCCTATGGGAAATCCTACACCCTGAATGTCGACGGATCATACAGCAACCAGTTTCCCAAAGCAGGGGCTGGATGTTTGATCCGAGACAATGAAGGCGAGCTGATTGTTGCGGCTTCTTACAATCTTATTGCTGATATTGATCCTGCTAATTGGGACGTTGCTATAGTAGAAGCACTGGCTTTCAAAAACGGCTTAAATCTAGCTAAGCGCAACAACATCAAGCTCAATCTCATCAAAGGCGACAATAAGGAGGTCATTGATCATATCCAAAGTCGCACTTGGGGGGTGCCTAGAGCGCCCTTGAGTGCAATCATCAAGGAGATCAATGCCCTTTTAAATGAGCAGAAGATCAATCCCAACTCCCAGATCGAGAAAATCGAAAGAGAAGCAAATGAAGCTGCTGATAAATTAGCTTCCTTAGGAGCAAAGCTAATTAGTGGTAGTAGTTTCAAAATTTATAAAAGCGAAGATGAACTTCCTTATTCGGTAGCTGAGATTATTAGGAGAGAAAAATCATCGTCGAGCAGTGGTGGTGACTTGGCCTCATCCATAGGGATGTTTGGAGCAGCGGTTGCTGGAGCAGCGATGATCGGGTGGGGTGTTTCTAAGCTCTTAAGTGGTGATGACTTCAACGACCAACGACAAAACAAGGCTAAATCAACATGGGACTTGCAACAAGAATTTTACACCCTTAATGTTGATGGGATGGATAGTAACCAGTGGGAAGAAGGCGCGGCAGGGTGTATTATAAGAGACAAGCAGGGGGAACTTTTAGTGGCCGCGTCTTACAATCTTAGTAAGTGTTATCCTGGTGGTCATATTGGCATTGCGGAAGCAATGGCCTTGAAGAAGGGTCTGGAGTTGTCTAGAGATTACGGCCTTAAGCTCAATGTTGTTAGAGGTGACAACGAAGAGGTGATCAATCGTGTCCTGGGTTTTGAAAGGAGGCCACCTAAGAATCGTAAATTGAGTGTGATTGTGCAACAAATTAAAGCTCTTCTTTTGGAGCAGTCCATCGATCCCAAGACCCAGCTCAAGATTGTACCTAGTGAAGCTAACAAGGTTGCTGATAAATTAGCCTCGCTCGGACGTGGAATCTTCCAAGAGCAGATTTATACAAGGGGAGATTTTGGCCTTCCTCGTGATGTAGCCTACCTGATTCAACAGGATCAGGAAGATGGGAATTTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_24936.p1 GENE.R_Transcript_24936~~R_Transcript_24936.p1 ORF type:5prime_partial len:448 (+),score=68.73,RVT_3|PF13456.2|1.1e-12,RVT_3|PF13456.2|1.8e-10,RNase_H|PF00075.20|2.4e+03,RNase_H|PF00075.20|0.079,RNase_H|PF00075.20|1 R_Transcript_24936:2-1345(+)
EYQLIIYTSSTIIYFSITRHTNINLKRTKRKKRGKKKSLVKLIMSFLLGGSSYGKSYTLNVDGSYSNQFPKAGAGCLIRDNEGELIVAASYNLIADIDPANWDVAIVEALAFKNGLNLAKRNNIKLNLIKGDNKEVIDHIQSRTWGVPRAPLSAIIKEINALLNEQKINPNSQIEKIEREANEAADKLASLGAKLISGSSFKIYKSEDELPYSVAEIIRREKSSSSSGGDLASSIGMFGAAVAGAAMIGWGVSKLLSGDDFNDQRQNKAKSTWDLQQEFYTLNVDGMDSNQWEEGAAGCIIRDKQGELLVAASYNLSKCYPGGHIGIAEAMALKKGLELSRDYGLKLNVVRGDNEEVINRVLGFERRPPKNRKLSVIVQQIKALLLEQSIDPKTQLKIVPSEANKVADKLASLGRGIFQEQIYTRGDFGLPRDVAYLIQQDQEDGNF*

Click here to download the sequence:
Link to NCBI Protein BLAST