Transcript Information: R_Transcript_249737.p1


Annotated TAIR IDAT4G39530.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:18374736-18377240 | Reverse length=834
E-Value2E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.40116397702679
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.24572397627677
Replicate 30.19946824857568
Condition 3: 24 Hour
Replicate 10
Replicate 20.24236548231404
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_249737.p1 GENE.R_Transcript_249737~~R_Transcript_249737.p1 ORF type:internal len:91 (+),score=17.84,PPR_2|PF13041.2|5.5e-13,PPR_2|PF13041.2|4.2,PPR|PF01535.16|2e-08,PPR|PF01535.16|2.6e+02,PPR|PF01535.16|2.1e+02,PPR_1|PF12854.3|3e-07,PPR_1|PF12854.3|1.8e+03,PPR_1|PF12854.3|56 R_Transcript_249737:2-271(+)
TTTGATTCAGTGACTGAGAGCAATGTGGTATCTTATAATGCAATGATTGAAGGATACTCAAGACAGGAAAAGCTCCCAGAAGCACTGAATCTTTTCCATGAGATGAGGATTAAATCTACACACCCGAACCTCTTGACATTTGTTAGCCTTCTTTGTGCTTCAGCATCAAAATCTGCTTTGGAAGTGAGCAAGCAAATTCATGGTCTGATGATTAAGGCAGGAGTTTCAAGGAATTTGTTTTCTAGCAGTGCTCTAATAGATGTCTATTGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_249737.p1 GENE.R_Transcript_249737~~R_Transcript_249737.p1 ORF type:internal len:91 (+),score=17.84,PPR_2|PF13041.2|5.5e-13,PPR_2|PF13041.2|4.2,PPR|PF01535.16|2e-08,PPR|PF01535.16|2.6e+02,PPR|PF01535.16|2.1e+02,PPR_1|PF12854.3|3e-07,PPR_1|PF12854.3|1.8e+03,PPR_1|PF12854.3|56 R_Transcript_249737:2-271(+)
FDSVTESNVVSYNAMIEGYSRQEKLPEALNLFHEMRIKSTHPNLLTFVSLLCASASKSALEVSKQIHGLMIKAGVSRNLFSSSALIDVYC

Click here to download the sequence:
Link to NCBI Protein BLAST