Transcript Information: R_Transcript_250128.p1


Annotated TAIR IDAT5G42905.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17201414-17202323 | Reverse length=258
E-Value1E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4239898617156
Replicate 21.1416428122337
Replicate 31.2455200111383
Condition 2: 8 Hour
Replicate 10.57886205549043
Replicate 20.68721386273147
Replicate 30.42911609031648
Condition 3: 24 Hour
Replicate 10.97692796713634
Replicate 21.1992221146177
Replicate 31.3970875332062


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_250128.p1 GENE.R_Transcript_250128~~R_Transcript_250128.p1 ORF type:complete len:423 (+),score=36.51,RVT_3|PF13456.2|1.3e+04,RVT_3|PF13456.2|6.5e-18,zf-RVT|PF13966.2|1.9e-17 R_Transcript_250128:85-1353(+)
ATGGAACGGCGACCTTCTTGGTTGCATAAGTGGGCCACTCCCTCGCCTCTCGAAAACATGGTGCTCAGCCCTCTGGACGACGACACCATGTTCAAGACCGTAGCAGACTATTGGGATGGCGAGCGGTGGAAGTGGGACCTCTTCTCCCACCTCCTACCCCAAGAGGCATTAGCAAAGATCGCTGCTTTTTCATTGACTAAGGAACTAGGCACACGGGATAGAATTTCTTGGCAGCCTTCTCAATCTGGAAACTTCTCAGTGAAGTCCGCCCTGGACATTATTCGCCAAGACCACCCACCCGAGACTAACATCCAATGGGCAAAAATATGGAAACTCCCGGCAACACAACGGGCCAGGAATTTTATGTGGCTCGCCCTGCATGATAGCTTCTTATGCAATTCAAATAAGTTTCGTCGGCAACTGACTAATGACCCTTCGTGCCGCAGCTGTGATCATTTTGAAGAAACAGGTCTGCATGTGCTGCGCGACTGCCCACGAGCCAAGGAAGTGTGGGATGCAATACTTCCCTATTCAATCAGAGGAAGTTTCTATACCTCCTCACAAGTGGAATGGATCTTTAAAAATATTGGGGCACAAGGTGACTGGCCTACCATTTTTGCCACTACCTTATGGTGGATTTGGAGATGGAGAAATAGCCGCTGCTTTGGTCCAGGATCTGACATCCCACAAAACCGCCCCGACTTTGTTTTGAGACAAAGCATGGAATATGTAGAAGCAGTAGCAGGACGAACTCGACTAAGCCCAGGCTCCATGAGAAAGGATGAGCATCTTAGCATTGGTTGGAAGCCCCCACCCCAAGGCTGGGTCAAGCTCAACACTGATGGAGCAGCGAAAGGAGCACCAGGACCGGCAGGAGGAGGAGGTCTTCTACGTACAGAGTTGGGTGGATTTGTGAAGGGTTTCACAGTTAAAATAGGAACCTCTACTGCTGAACTGGTGGCAGTGCTAAGAGGGTTACAGATTGCAAGGAATCTCTGTCTCACGAAGGTTATGGTGGAAATGGACTCTGAACTAGCAATCAAAATGCTCAGAGGGACAACACCATCTTTCAGTCCTCATTATTTTCTTATAGAGCAATGTAAAGCTTTACTGGATAGTCCCCACTGGGAGACCCGAGTACGCCATATCTATCGGGAGGCCAATAAGGCAGCTGACTCCTTTGCAAAACTTAGCTTTAGAATGGAGGAAAACTATCATGAGTTCCCATCGCCCCCCCTAGTACCATGCATGTGCTTTTCGAGGACCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_250128.p1 GENE.R_Transcript_250128~~R_Transcript_250128.p1 ORF type:complete len:423 (+),score=36.51,RVT_3|PF13456.2|1.3e+04,RVT_3|PF13456.2|6.5e-18,zf-RVT|PF13966.2|1.9e-17 R_Transcript_250128:85-1353(+)
MERRPSWLHKWATPSPLENMVLSPLDDDTMFKTVADYWDGERWKWDLFSHLLPQEALAKIAAFSLTKELGTRDRISWQPSQSGNFSVKSALDIIRQDHPPETNIQWAKIWKLPATQRARNFMWLALHDSFLCNSNKFRRQLTNDPSCRSCDHFEETGLHVLRDCPRAKEVWDAILPYSIRGSFYTSSQVEWIFKNIGAQGDWPTIFATTLWWIWRWRNSRCFGPGSDIPQNRPDFVLRQSMEYVEAVAGRTRLSPGSMRKDEHLSIGWKPPPQGWVKLNTDGAAKGAPGPAGGGGLLRTELGGFVKGFTVKIGTSTAELVAVLRGLQIARNLCLTKVMVEMDSELAIKMLRGTTPSFSPHYFLIEQCKALLDSPHWETRVRHIYREANKAADSFAKLSFRMEENYHEFPSPPLVPCMCFSRT*

Click here to download the sequence:
Link to NCBI Protein BLAST