Transcript Information: R_Transcript_250199.p1


Annotated TAIR IDAT1G64140.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: loricrin-related (TAIR:AT5G64550.1); Has 3596 Blast hits to 2004 proteins in 150 species: Archae - 0; Bacteria - 54; Metazoa - 1597; Fungi - 38; Plants - 513; Viruses - 9; Other Eukaryotes - 1385 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:23804069-23806009 | Reverse length=646
E-Value3E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.764566716885
Replicate 25.0606467670052
Replicate 37.6355791987175
Condition 2: 8 Hour
Replicate 14.143761760303
Replicate 25.9629018243162
Replicate 38.0984108921726
Condition 3: 24 Hour
Replicate 18.5944611672944
Replicate 24.9765712368482
Replicate 38.306103317079


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_250199.p1 GENE.R_Transcript_250199~~R_Transcript_250199.p1 ORF type:3prime_partial len:195 (-),score=42.80 R_Transcript_250199:1-582(-)
ATGGGCACTAGGGTTCCAGGTTTGGGCTTTCATTTTAACAATTCATCAAATGCATTCAAGGGTCTGGGAGAGTCGTTTCAAGTTCAATGTTCTGGATCTGATTACTGTGCAGATACCATCCTACAGCTGCATCCTGTTGGATCTACTGTCCCTCACTTCCCTCTGTCAAGAGGAGTGAAGCGTAAGTGGGGTTGGGGTGATGGAAACATGAGCCTGCATGTTGACCCTTCATTGTGTCTTGGACTGGGTCGTTCATCTAGTTCATCAGACAGCAAAGGTAGCTCAGCAACTGGCTGTACTGCCATTTCTTCAGCCAAAGAAACTGAGGCAGAATCCTCAATGGATCTTGATTTAGACTTTTCTCTCCACCTTGGTAGTGATAAGTCAACTAGCCCAAAGAAACCTGCAGTTTTATGTTATAAGGGAGTAGATCCACAGAAGAAGCTTGATTTGGAGCTCAGCCTTTCTACTGGGCCTTCTGAATCAGACATCACCAGCATCCATGAAGGTTTATATGGCGTTCAAAATCTAGAGCCTCCCTTGGCTGTTGAGGTAACAAATTTTGTGGATAATGAATCGGCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_250199.p1 GENE.R_Transcript_250199~~R_Transcript_250199.p1 ORF type:3prime_partial len:195 (-),score=42.80 R_Transcript_250199:1-582(-)
MGTRVPGLGFHFNNSSNAFKGLGESFQVQCSGSDYCADTILQLHPVGSTVPHFPLSRGVKRKWGWGDGNMSLHVDPSLCLGLGRSSSSSDSKGSSATGCTAISSAKETEAESSMDLDLDFSLHLGSDKSTSPKKPAVLCYKGVDPQKKLDLELSLSTGPSESDITSIHEGLYGVQNLEPPLAVEVTNFVDNESA

Click here to download the sequence:
Link to NCBI Protein BLAST