Transcript Information: R_Transcript_250452.p2


Annotated TAIR IDAT1G64140.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: loricrin-related (TAIR:AT5G64550.1); Has 3596 Blast hits to 2004 proteins in 150 species: Archae - 0; Bacteria - 54; Metazoa - 1597; Fungi - 38; Plants - 513; Viruses - 9; Other Eukaryotes - 1385 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:23804069-23806009 | Reverse length=646
E-Value2.3E-66
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.36874668595391
Replicate 20.42416768517774
Replicate 30
Condition 2: 8 Hour
Replicate 10.24733196916409
Replicate 20.67760248003593
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.22278039283411
Replicate 30.66326377839083


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_250452.p2 GENE.R_Transcript_250452~~R_Transcript_250452.p2 ORF type:complete len:99 (-),score=28.55 R_Transcript_250452:51-347(-)
ATGGTGGTGGTAAGAGATGTCAAATGGAGAACTGTACTAGAAGTGCAGAAGGCTTGTCAGGACTATGCATTACTCATGGTGGAGGGCGTCGATGCCAATATCCATTGTGCACAAAGGGAGCTCAAGGAAGCACAATGTTCTGCAAAGCACATGGTGGTGGAAAACGTTGCACTGTTGAAGGGTGTACCAAAGGTGCTGAGGGAAGCACACCCTTCTGCAAGGGCCATGGTGGAGGGAAAAGGTGTTCTTTCCAGGGATGCCCAAAGAGTGTTCATGGTGGGACTTCCTTCTGTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_250452.p2 GENE.R_Transcript_250452~~R_Transcript_250452.p2 ORF type:complete len:99 (-),score=28.55 R_Transcript_250452:51-347(-)
MVVVRDVKWRTVLEVQKACQDYALLMVEGVDANIHCAQRELKEAQCSAKHMVVENVALLKGVPKVLREAHPSARAMVEGKGVLSRDAQRVFMVGLPSV*

Click here to download the sequence:
Link to NCBI Protein BLAST