Transcript Information: R_Transcript_250500.p1


Annotated TAIR IDAT5G24740.1
Annotated Gene NameProtein of unknown function (DUF1162)
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:8470073-8489703 | Reverse length=3464
E-Value1E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.18257652535911
Replicate 30.19918902257524
Condition 2: 8 Hour
Replicate 10
Replicate 20.19444245079292
Replicate 30
Condition 3: 24 Hour
Replicate 10.19963310632786
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_250500.p1 GENE.R_Transcript_250500~~R_Transcript_250500.p1 ORF type:internal len:115 (+),score=21.80,VPS13|PF16908.1|1.8e-10 R_Transcript_250500:3-344(+)
GGAATTCATTGTAGCAATATACAAGGGTCTTTCGATTTCATGTGTCGTGATGGTACTGTTGAGAGTCAAAAATGGCACGATGCACTAAGTGACGTTGGTAAATATGACTATATTGTGGTGCCGTTTGATGCATCTTTTCTGGTGATAAATTCTGGAAAGCTTGAGGGGGATGCTCCACAATATTCTGTTACTGCTGAGCCGACAAAGCTGGTAATGACTATAAGTTGTGCTCAACTGCAGCATATTTTGGAGTTTTTGGACTATATCAACACATGTCAGCTGTGGGAAAAGTATGGGCGCTATCGTCCATGGGGTTGTCCATTGTCAAAGAAATTGAAGGGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_250500.p1 GENE.R_Transcript_250500~~R_Transcript_250500.p1 ORF type:internal len:115 (+),score=21.80,VPS13|PF16908.1|1.8e-10 R_Transcript_250500:3-344(+)
GIHCSNIQGSFDFMCRDGTVESQKWHDALSDVGKYDYIVVPFDASFLVINSGKLEGDAPQYSVTAEPTKLVMTISCAQLQHILEFLDYINTCQLWEKYGRYRPWGCPLSKKLKG

Click here to download the sequence:
Link to NCBI Protein BLAST